Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2742 ATGTCGCCGCCGATTCCTATAAGCTCCAGCTATGCTTCCACCTTCTCTTATTCTGCAATTCTCTTTCCGTTCGTATTCGCTCGTAACAACTTCACCGGAATCAAACTTCATCCAACTGTCTTTTGCCAATTTGAACCTAAAACAGAGAAACCGCTGACAAGAAGGTGCTCCCCCTTTCTAGAAAGTTCGTTACTATCTGGTAGTGATGTTGTGGCCTCAGACGAGTGGAAAGCTGTTCCTGATATTTGGAGATCTTCTGCCGAGAAGTATGGTGACAAAATAGCATTAGTGGATCCGTATCATGATCCTCCTTCAACTATGACATACAAAGAGTTGGAGGATGCAATATTGGACTTTGCTGAAGGTTTGAGAGTTATTGGAGTAAGACCCTATGAAAAGCTTGCACTTTTTGCTGATAATTCTTGTCGCTGGCTTGTAGCAGATCAAGGTATGATGGCATGTGGGGCAATCAATGTGGTAAGGGGTTCGAGGTCATCAATTGAAGAACTGCTGCAAATTTACAACCATTCTGAAAGTGTTGCACTAGCTGTGGACAATCCTGAAATGTTTAATCGGATTGCAAAACTGTTTTATTCGAAGACTTCAATGAGATTTATTATTCTGCTTTGGGGAGAAAAATCAGGCCTAGTCAGTGAAGGAGAAAAGGGGGTGCCTGTCTATACTTTCATGGAAGTCGTACATTTGGGACAAGAGAGTCGCAGAGTATTGTTTGATTCTCTTGATAATAGGAAGCACTACATGTATGAAGCAATCAAATCTGATGACATTGCTACCCTTGTATACACAAGTGGAACTACTGGAAATCCAAAAGGTGTTATGCTAACCCATCAGAATCTTTTGCATCAGATAAAAAACTTAGGGGATATTGTACCTGCTGAAGTTGGGGATAGATTTCTAAGTATGTTGCCTTCCTGGCATGCATATGAAAGAGCTTCTGAATATTTCATTTTCTCGTGCGGCGTTGAGCAAGTATACACAACTGTGAGAAAGTTGAAGGATGATTTGAGACGTTATCAGCCACATTACTTGATTTCTGTTCCTTTAGTTTATGAAACTTTATACAGTGGGATCCAGAAACAGATATCTACAAGCTCCCTAGTCAGAAAGCTTGTCGCACTCACATTCATAAGGGCCAGCTTGAGGTACATGGAATGCAGGCGTATTTATGAGGGTAAATGTCTAATGAAGGATCAAAAGCCGCCTTCGTATCTTCATTCTATGTTGGATTGGTTATGGGCCAGAATTATTGCCACAATATTATTTCCAGTTCATTTGCTGGCAACGAAACTGGTCTACAGTAAAATTCATTCAGCTATTGGAATTTCAAAGGCTGGAATAAGTGGTGGTGGTAGCCTATCTTCTCACGTAGATAGATTTTTTGAGGCTATTGGTGTGACTGTGCAGAATGGATATGGTTTAACAGAAACTTCACCAGTTATTGCTGCCCGACAACTTAGTTGTAATGTTATTGGGTCTGTTGGGCATCCAATTAAGCATACAGAATTCAAAGTCATAGATTCTGAGACTGATGAGGTTCTCCCACCTGGTTCAAAGGGAATTTTGAAAGTCCGAGGTCCACAATTGATGAAGGGATACTACAAGAATCCTTCAGCTACAAATCAGGTCTTAGACAGGGATGGCTGGCTGAATACCGGGGATATTGGTTGGATTGTTCCCCATCATTCAACTGGGCGGAGTCGAAATTCCAGCGGAGTAATTGTTGTGGATGGTCGTGCTAAAGACACTATTGTGCTTTCTACAGGTGAAAATGTTGAACCCGGAGAGCTTGAAGAAGCTGCCATGAGGAGTAGCCTCATACATCAAATTGTTGTTATTGGACAGGATAAGCGACGTTTAGGGGCTGTCATTGTTCCCAACAATGAAGAAGTCCTTAAGGCAGCAAGGGAGTCATCAATTATAGATCCTAACAGTTCAGATGTCGTTCAGGAAAACGTGACCAGCCTAATATGTAAAGAATTAAGGACATGGACATCAGAGTCTCCATTTCAAATTGGACCAGTCCTTGTCGTAAATGACCCCTTCACGATTGATAATGGCCTTATGACACCCACCATGAAAATTCGAAGGGATAAAGTTGTGGCTCAATACAGGGACCAAATAGAGAATCTATACAAGTAA 2160 0.4153 MSPPIPISSSYASTFSYSAILFPFVFARNNFTGIKLHPTVFCQFEPKTEKPLTRRCSPFLESSLLSGSDVVASDEWKAVPDIWRSSAEKYGDKIALVDPYHDPPSTMTYKELEDAILDFAEGLRVIGVRPYEKLALFADNSCRWLVADQGMMACGAINVVRGSRSSIEELLQIYNHSESVALAVDNPEMFNRIAKLFYSKTSMRFIILLWGEKSGLVSEGEKGVPVYTFMEVVHLGQESRRVLFDSLDNRKHYMYEAIKSDDIATLVYTSGTTGNPKGVMLTHQNLLHQIKNLGDIVPAEVGDRFLSMLPSWHAYERASEYFIFSCGVEQVYTTVRKLKDDLRRYQPHYLISVPLVYETLYSGIQKQISTSSLVRKLVALTFIRASLRYMECRRIYEGKCLMKDQKPPSYLHSMLDWLWARIIATILFPVHLLATKLVYSKIHSAIGISKAGISGGGSLSSHVDRFFEAIGVTVQNGYGLTETSPVIAARQLSCNVIGSVGHPIKHTEFKVIDSETDEVLPPGSKGILKVRGPQLMKGYYKNPSATNQVLDRDGWLNTGDIGWIVPHHSTGRSRNSSGVIVVDGRAKDTIVLSTGENVEPGELEEAAMRSSLIHQIVVIGQDKRRLGAVIVPNNEEVLKAARESSIIDPNSSDVVQENVTSLICKELRTWTSESPFQIGPVLVVNDPFTIDNGLMTPTMKIRRDKVVAQYRDQIENLYK* 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2742 719 Gene3D - 589 716 IPR045851 -
Pvu1g2742 719 Gene3D Luciferase; Domain 3 494 564 - -
Pvu1g2742 719 Gene3D - 74 398 IPR042099 -
Pvu1g2742 719 Gene3D - 450 493 - -
Pvu1g2742 719 PANTHER ACYL-ACTIVATING ENZYME 16, CHLOROPLASTIC-RELATED 6 719 - -
Pvu1g2742 719 Pfam AMP-binding enzyme 85 592 IPR000873 -
Pvu1g2742 719 ProSitePatterns Putative AMP-binding domain signature. 266 277 IPR020845 -
Pvu1g2742 719 PANTHER LONG-CHAIN-FATTY-ACID COA LIGASE (AMP-FORMING) 6 719 - -
Pvu1g2742 719 SUPERFAMILY Acetyl-CoA synthetase-like 75 718 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2742 Pvu-Chr1 51879078 51890295 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g2742 45 719 Acyl Lipid Metabolism Gene Families AT3G23790 69.675 0.0 1001
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2742 K01897 - gmx:100782583 1285.4