Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2741 ATGGCATTGCCAATGCTGTCATTTGGCTCTGTCATCTTTCACTCCTTCAACTGCACTTCCCTTCCAATTCCACACACTTCATGTCACTGCTCACTCTCTTCCCACCCTTCTTCACACCACCTTCGTTTACGATTTGGGAGAGAGTCACCAAGCGCAAGGATATGTGCTTCAGTTACAGATGTTTCAGTGGATGTAGCTGTGGAGGAAAAAAGGCTCCCCAAAGGAGAAACTTGGTCTGTTCACAAGTTTGGTGGAACCTGTGTGGGAAACTCATCGAGAATTAAGAATGTTGCAGACATAATTATCAATGATGATTCTCAGAGGAAATTTGTTGTGGTCTCTGCTATGTCAAAAGTGACAGATATGATGTATGATCTTATCTACAAGGCTCAGTCCCGTGACGAGTCTTATGTTTCTGCCCTGGATGTTGTTTTGGAGAAGCACAGCTCAACTGCACATGACCTAATTGCTGGAGAAGATCTTGCTGCTTTTTTATCTCAGTTGCATCAAGACATCAGTGACCTCAAAGCAATGCTTCAGGCCATATACATAGCTGGTCATGCTACAGAATCCTTTACTGAATTTGTTGTGGGTCACGGAGAGTTATGGTCTGCACAGATATTGTCTTTAGTAATTAAGAAACAAGGGACTGACTGCAAATGGATGGATGCGAGGGAAGTCCTTATTGTAAAACCTACTCGTTCTGATCAAGTTGACCCGGATTACTTGGAATCTGAACGAAGACTTGAGAAATGGTACTCTATAAATCCATCTGATGTAATCATTGCCACAGGATTTATTGCAAGCACACCTCAGAATATTCCTACTACTCTCAAGAGAGATGGAAGTGACTTCTCTGCAGCTATTATGGGTGCTCTCTTTAAGGCTCGTCAGGTCACAATTTGGACAGATGTAGATGGCGTGTATAGTGCAGATCCTAGAAAAGTCGGTGATGCTGTGATTTTGAAGACACTGTCTTATCAAGAAGCATGGGAAATGTCTTATTTTGGTGCCAATGTCTTACATCCACGCACAATAACTCCAGTTATTCGATATGGCATACCAATCATAATAAGGAATATTTTCAACCTTTCTTCTTCTGGAACAATGATCTGCCATCCTTCTATTATTGGTGATGAAGATAAGCTGAAGTTAAAAAATTATGTCAAAGGCTTTGCAACCATAGACAACTTGGCACTCGTGAATGTGGAGGGAACGGGAATGGCTGGTGTTCCAGGAACTGCTAGCGCTATTTTTGCTGCAGTAAAAGATGTTGGAGCGAATGTTATTATGATATCACAGGCTAGTAGTGAGCATTCTGTGTGCTTTGCTGTTCCTGAGAAAGAAGTAAAAGCAGTTGCCGAGGTGTTGCAGTCTTTATTTGATGGCGCTTTGAATGTTGGTCGTCTTTCTCAGGTTGCAGTCCTTCCAAATTGTAGTATTTTGGCAGCTGTCGGCCAGAAAATGGCAAGTACTCCTGGAGTTAGTGCCACCCTTTTCGATGCATTGGCAAAGGCCAACATAAATGTACGTGCAGTAGCACAAGGTTGTTCTGAGTACAACATCACCGTAGTTGTAAAGCGGGAGGATTCTGTAAAGGCTTTACGTGCTGTTCATTCCAGATTTTATCTCTCCAGAACCACCATAGCAATGGGCCTTGTTGGGCCTGGATCAATTGGAAGCACACTTCTTGACCAGCTAAAAGATCAGGCTGCAATTCTGAAAGAGGAATTTAACATTGATTTGCGTGTAATGGGGATCATTGGTTCTAAGCTGATGCTCCTTGATGATGACGAGGGCATCAACTTAGACAAATGGAGAGAACTTCGAGAAGAAAAAGGAGAAGTTGCTGATTTGGAAAAATTTGTTCAAAATGTGCATGGAAATCATTTTATACCAAACACTGTGTTGGTGGACTGCACAGCCGACACAGTCATAGCTAGCAATTACGATGATTGGCTGTGCAAAGGAATACATGTGATCACTCCCAACAAGAAGGCAAATTCAGGACCACTTAATGAGTATTTGAGGTTAAGAGCTCTTCAGAGGCAATCTTACACACATTACTTCTATGAAGCCACTGTTGGGGCTGGTCTTCCAATTATCAGCACTTTACGGGGCCTTCTTGAGACTGGTGACAGAATATTGCAAATTGAAGGTATCTTCAGTGGGACTTTGAGTTACATCTTTAACAACTTCAAAGATGGCCGTCTTTTTAGTGAGGTAGTAGCTGAAGCAAGGGATGCAGGTTTTACCGAGCCTGATCCAAGGGATGACCTGTCAGGAACTGATGTTGCTAGAAAGGTGATAATTCTCGCAAGGGAATCGGGTTTGAAGCTAGAGCTTTCTGATATTCCCGTTGAAAATCTGGTGCCAGAACCACTAAGAGTTAGTGCATCAGCTGAAGAGTTTATGCAGCAACTGCCAAAATTTGATCAGGAATTAGCAGAGAAATTAAAAGATGCAGAGAGTGCTGGAGAAGTGTTGAGATATGTGGGGGTGGTGGACGTGAGAAACAGCAAAGGAGTGGTAGAGCTGAGAAGATTCAAGAAGGATGATCCATTTGCACAAGTATCAGGATCAGATAACATGATTGCTTTCACAACAAGAAGGTACAAAACTCAGCCTCTCATTGTTCGTGGACCTGGAGCTGGTGCACAAGTCACTGCTGCTGGAATATTCAGTGACATATTAAGACTTGCCTCATATCTTGGTGCTCCATCATAG 2727 0.4276 MALPMLSFGSVIFHSFNCTSLPIPHTSCHCSLSSHPSSHHLRLRFGRESPSARICASVTDVSVDVAVEEKRLPKGETWSVHKFGGTCVGNSSRIKNVADIIINDDSQRKFVVVSAMSKVTDMMYDLIYKAQSRDESYVSALDVVLEKHSSTAHDLIAGEDLAAFLSQLHQDISDLKAMLQAIYIAGHATESFTEFVVGHGELWSAQILSLVIKKQGTDCKWMDAREVLIVKPTRSDQVDPDYLESERRLEKWYSINPSDVIIATGFIASTPQNIPTTLKRDGSDFSAAIMGALFKARQVTIWTDVDGVYSADPRKVGDAVILKTLSYQEAWEMSYFGANVLHPRTITPVIRYGIPIIIRNIFNLSSSGTMICHPSIIGDEDKLKLKNYVKGFATIDNLALVNVEGTGMAGVPGTASAIFAAVKDVGANVIMISQASSEHSVCFAVPEKEVKAVAEVLQSLFDGALNVGRLSQVAVLPNCSILAAVGQKMASTPGVSATLFDALAKANINVRAVAQGCSEYNITVVVKREDSVKALRAVHSRFYLSRTTIAMGLVGPGSIGSTLLDQLKDQAAILKEEFNIDLRVMGIIGSKLMLLDDDEGINLDKWRELREEKGEVADLEKFVQNVHGNHFIPNTVLVDCTADTVIASNYDDWLCKGIHVITPNKKANSGPLNEYLRLRALQRQSYTHYFYEATVGAGLPIISTLRGLLETGDRILQIEGIFSGTLSYIFNNFKDGRLFSEVVAEARDAGFTEPDPRDDLSGTDVARKVIILARESGLKLELSDIPVENLVPEPLRVSASAEEFMQQLPKFDQELAEKLKDAESAGEVLRYVGVVDVRNSKGVVELRRFKKDDPFAQVSGSDNMIAFTTRRYKTQPLIVRGPGAGAQVTAAGIFSDILRLASYLGAPS* 909
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2741 908 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 700 885 - -
Pvu1g2741 908 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 547 722 IPR036291 -
Pvu1g2741 908 PANTHER - 31 908 IPR011147 GO:0004072|GO:0004412|GO:0009067
Pvu1g2741 908 SUPERFAMILY ACT-like 387 462 IPR045865 -
Pvu1g2741 908 ProSiteProfiles ACT domain profile. 484 558 IPR002912 -
Pvu1g2741 908 Pfam ACT domain 407 461 IPR002912 -
Pvu1g2741 908 ProSitePatterns Homoserine dehydrogenase signature. 746 768 IPR019811 GO:0006520
Pvu1g2741 908 Pfam Homoserine dehydrogenase, NAD binding domain 555 692 IPR005106 GO:0016491|GO:0050661
Pvu1g2741 908 PANTHER ASPARTOKINASE-HOMOSERINE DEHYDROGENASE 31 908 - -
Pvu1g2741 908 CDD ACT_AKi-HSDH-ThrA_2 479 544 - -
Pvu1g2741 908 SUPERFAMILY ACT-like 470 555 IPR045865 -
Pvu1g2741 908 Pfam Homoserine dehydrogenase 700 898 IPR001342 GO:0006520
Pvu1g2741 908 Gene3D - 550 900 - -
Pvu1g2741 908 Gene3D Dihydrodipicolinate Reductase; domain 2 711 882 - -
Pvu1g2741 908 SUPERFAMILY Carbamate kinase-like 79 373 IPR036393 -
Pvu1g2741 908 Gene3D - 78 374 IPR036393 -
Pvu1g2741 908 ProSitePatterns Aspartokinase signature. 80 88 IPR018042 GO:0004072|GO:0008652
Pvu1g2741 908 ProSiteProfiles ACT domain profile. 403 472 IPR002912 -
Pvu1g2741 908 TIGRFAM asp_kinases: aspartate kinase 78 542 IPR001341 GO:0004072|GO:0008652
Pvu1g2741 908 Pfam Amino acid kinase family 79 360 IPR001048 -
Pvu1g2741 908 CDD ACT_AKi-HSDH-ThrA-like_1 398 475 - -
Pvu1g2741 908 Pfam ACT domain 477 540 IPR027795 -
Pvu1g2741 908 Gene3D - 385 544 - -
Pvu1g2741 908 CDD AAK_AK-HSDH 78 372 IPR041743 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2741 Pvu-Chr1 51867571 51874451 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2741 K12524 - gmx:100812202 1420.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2741 1 51867571 51874451 Pvu1g2741 1 51867571 51874451 ECH