Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2737 ATGGTGAATGCTATGACTCACAGTCAGAATCAGTGTGTGTTGGCGTTGAAGTTGAATCCCAATTGCAGAGGAAGGAAGAGCAGTTGCAGCACCTTCTTCCCAAAACCCTTTGCCACATTCCCATGCCTCACCACTCAAATTTGCCACGCATTCGGTGACACAGTTTCAGACTCGAAGCACAGAACCCTTCTGGTTGAGACTTACCATCACCATGACAGCCTCAGAGCCTTACTTGCAAAGCTTGAGAGGGAGGATTCGAACCCAATGTACATACTCGCCCAAGATGGAGACTGGTCCAAAGATCATTTTTGGGCTGCTGTCAGGTTCCTTAAGAATGCCTCTAGGTTCGTGGAAATCCTTCAGGTGTTTGATATGTGGAAGGAAATTGAGAAATCACGGATTAGTGAGTTCAACTATAACAAGATAATAGGCTTGTTATGTGAAGATGAAATGATGGAAGAAGCTTTATCTGCATTTCAAGAGATGAAAGTTCAAGGTATGAAGCCCTCTTTGGACACTTACAATCCAATAATTCATGGATTATCCAAAGCTGGTAAGTTCAGTGATGCTTTGCGGTTTTTAGATGAGATGAAAGAATCTGGCTTAGACCCAGATTCTGAAACCTATGATGGTTTGATTGGAGCCTATGGGAAATTTCAACTGTATGATGAGATGGGTGAGTGTGTGAAAAAGATGGAGTTGGAAGGGTGTTCTCCTGATCATATCACTTATAATATACTTATCCAGGAGTATGCTCGAGCTGGGATTCTCCAGAGAATGGAAAAGCTATACCAGAGAATGCTTTCAAAGAGAATGAGACTGCAATCTTCTACTTTTGTTGCAATGCTAAAGGCTTACACCACATTTGGGATTGTTGAAAAGATGGAATTTTTTTTCAGAAAAGTCTTGAATTCAAAATCATGTCTAGAGGACGATTTCATAAGAAAAATGGCTGAAGTTTATATCAAGAACTATATGTTTTCTCGACTAGAAGACCTGGCACTAGATTTATGTTCAGCATTTGGTGAGAGTGACCTTGTTTGGTGTCTCCGTCTCCTTTCTTATGCATGTCTCTTGAGTAAAAAAGGTATGGATATAGTTGTTAAAGAAATGCAAGATGCCAAGATTAATTGGAATGTTGCCTTTGCAAATATTATCATGTTGGCTTATGTGAAGATGAAAGATTTCAGGCATTTGAGAATTTTACTGTCCCAACTGCGAATCAATCGGTTGGGGCCTGATATTGTGACTATTGGAATTGTATTGGATGCCAGTAGAATTGGTTTTGATGGTAGAGGAGCTTTAGAATCATGGAGAAGAATGGGGTATCTGGACAGAGTAGTAGAATTGAAAACAGATTCTCTGGTCCTTACTGCATTTGGGAAAGGTCATTTTCTTAAAAGCTGTGAAGAAGTGTACACTTCCCTTCACCCTGAGGACAGAGAAAGGAAAAAATGGACTTACAATGATCTCATTGCTTTATTGACATAA 1491 0.4004 MVNAMTHSQNQCVLALKLNPNCRGRKSSCSTFFPKPFATFPCLTTQICHAFGDTVSDSKHRTLLVETYHHHDSLRALLAKLEREDSNPMYILAQDGDWSKDHFWAAVRFLKNASRFVEILQVFDMWKEIEKSRISEFNYNKIIGLLCEDEMMEEALSAFQEMKVQGMKPSLDTYNPIIHGLSKAGKFSDALRFLDEMKESGLDPDSETYDGLIGAYGKFQLYDEMGECVKKMELEGCSPDHITYNILIQEYARAGILQRMEKLYQRMLSKRMRLQSSTFVAMLKAYTTFGIVEKMEFFFRKVLNSKSCLEDDFIRKMAEVYIKNYMFSRLEDLALDLCSAFGESDLVWCLRLLSYACLLSKKGMDIVVKEMQDAKINWNVAFANIIMLAYVKMKDFRHLRILLSQLRINRLGPDIVTIGIVLDASRIGFDGRGALESWRRMGYLDRVVELKTDSLVLTAFGKGHFLKSCEEVYTSLHPEDRERKKWTYNDLIALLT* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2737 496 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 240 274 IPR002885 -
Pvu1g2737 496 TIGRFAM PPR: pentatricopeptide repeat domain 173 205 IPR002885 -
Pvu1g2737 496 TIGRFAM PPR: pentatricopeptide repeat domain 208 240 IPR002885 -
Pvu1g2737 496 TIGRFAM PPR: pentatricopeptide repeat domain 242 272 IPR002885 -
Pvu1g2737 496 TIGRFAM PPR: pentatricopeptide repeat domain 139 170 IPR002885 -
Pvu1g2737 496 Gene3D Tetratricopeptide repeat domain 222 333 IPR011990 GO:0005515
Pvu1g2737 496 Gene3D Tetratricopeptide repeat domain 334 496 IPR011990 GO:0005515
Pvu1g2737 496 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 170 204 IPR002885 -
Pvu1g2737 496 Pfam PPR repeat 139 166 IPR002885 -
Pvu1g2737 496 Gene3D Tetratricopeptide repeat domain 91 221 IPR011990 GO:0005515
Pvu1g2737 496 Pfam PPR repeat family 173 216 IPR002885 -
Pvu1g2737 496 Pfam PPR repeat 236 259 IPR002885 -
Pvu1g2737 496 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 14 495 - -
Pvu1g2737 496 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 205 239 IPR002885 -
Pvu1g2737 496 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN PET309, MITOCHONDRIAL 14 495 - -
Pvu1g2737 496 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 135 169 IPR002885 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g2737 115 441 Glycosyltransferase AT1G05670 23.193 8.34e-18 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2737 - - gmx:100808924 815.068