Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2729 ATGAAGCACTTCATGCTCCCAAGAAACCCTCTCAGGGACGCAGAATTTGCTTCTTCAGCAACCCCAACCCCTTCTCCTAGCTCCACCAAACACCGCCCCTCTCGCAAGCACAAACCCTCCAAAGAGAATGATCCTCCCTCCGATCCCAATCTCGCCGTCCCTTCCCCCGCTAAGTTCAAGAGCCCCTTGCCACCGAGACCACCTTCTTCCAACCCTCTCAAGCGCAAGCTCGCCATCGCCGCCGATGCCCTAACCGACAATCCACTCCCCGCGCCCTCCGATTCCGGCGTCAAGGTTATTGTGAGGATGAGGCCGCTCTGTCCCGACAAGGACGAAGGAGATCCCACTGTTCAGAAGGTTTCCAATGATTCGTTGTCCATCAATGGCCACAACTTCACCTTCGATTCCGTTGCTGACACTGTGGCTACTCAGCTCGATATTTTCGAACATGTTGGTGTGCCACTGGTGGAGCATTGCTTGGCTGGTTTCAATAGTTCAGTTTTTGCTTATGGACAGACGGGGAGTGGGAAGACTTACACAATGTGGGGTCCTGCCAACTGTTTGTTGGAAGAAAATGATCAGCAAGGACTTGCACCCCGTGTTTTTCAGCAACTATTTGCACGCATAAATGAAGAGCAAACTAAGCATTCTGACAAGCAACTCAACTATCAGTGCAACTGTTCTTTTCTTGAGATATACAATGAGCAAATCATGGATCTATTGGATCCAAATCAGAAAAACCTACAGATTCGAGAAGATGTCAAATCTGGTGTCTATGTTGAAAATCTTTCAGAGGAGCCCGTGTCTTCAATTAAGGATGTAACTCAGCTTTTAATAAAGGGATTATCGAACAGGAGAACCGGTGCAACCAGTATAAATTCGGAGAGTTCCCGCTCGCACACTGTTTTAGTTTGTGTAGTCGAATCTCGATGCAAGAGTGCAGCAGATGGTGTGAGCAGATTTAAAACAAGTAGGATCAATCTTGTTGATCTAGCTGGTTCAGAACGACAAAAATCAACAGGTGCTGCAGGAGAGCGATTGAAAGAAGCTGGGAATATTAATAGATCACTCTCACAGCTTGGGAATTTGATAAATATTCTTGCGGAGGTCTCTCAAACAGGAAAGCAGCGGCATATACCTTATAGAGATTCGAGGTTAACATTTCTGTTGCAGGAGTCTCTTGGAGGAAATGCAAAATTAGCAATGATTTGTGCTATTTCTCCAGCGCAAAGTTGTAGGAGTGAAACATTTAGTACACTGAGATTTGCGCAACGTGCCAAAGCTATCAAGAACAAGGCAGTTGTTAATGAAGTCATGGAAGAAGATGTGAAGCACTTGCGGCAAGTGATACGGCAACTAAGGGATGAGCTCCATCGAATGAAAGCAAATGGCTACAACACAATGGACTCAAATGGAGGTCATTCAGCAGCTTGGATCCGGCGAAGCTTGAATTTGTTACAATCCAGCCTGAATCGACCACCACCATTACCCCGTCTTGATGAAGATGGTGATGAGGAGATGGAAATTGATGAGGAAGGTGTTGAGGACCATGATGAAGTTTCCTGCAAAGCCATTATGCTGAGTAATTGTAATACTGTAGCTGATAATGACAATGGAATGAACACTGATGATCAGGATTTGACTCAACCTAGTGAGGAGAAAAATATACCTGGTTTGCCTGGCAGTAAAAATATTAGTGAAGAATCATCATGTGAAATGGTAGGAAACCGTTTCTCTTGTACTATGGGTGAGTCTGACCTTGGAAGTTTTGCTGGTTTTTCAGCCCCAGATGTGCCCAGTGATTCTCCTAGTGCAGCAATGAATTGTGTCTCACCTGCCAGCCTCAGCGTAGTTGCTTGTGATTTATCCCCAATCCTTAAATCCCCAGCTCCTAGTGTTTCACCTAGAATCAGTACCAGCTGCAAAAGTCTGAGGACATCAACAGGGTTGTCTCCTTCTGAGAGTGATCTTCATGTTGAAAAAGATTTGGGAATAAAAACTAGCAACAAGAAAAACTCATATTCGGCCTGTTCTAGTCAGACAGCTCCAAATTTCCTAAATAAAACAGAAAATTTAGCAGCAAGCATACGCCATGGTCTTGAAATTATTGATAGTTACCAACACAATTCAGCTTTGAGGCAATCTGCATATAGGTTTTCATTAGGGCCAAGAAAATCTAGATTAATTTTTCCAGTTGACAAAGTTGATGTGGGCCTGCAGACTTCTCTTGATGATGATGTTGTAGAAGATTCTGTTTTATTCACCTGTAGTAATTGTAAAAGCAGAGCACAACTTGATGTCAACAACACTGACAATAACTCAAACCTACAGTTAGTACCTTTTGATTGCCCTGGGTTTGCTGATAAGCCAAAGAAGCAAGTACTCAAAGCAGTAGAAAAGGTTTTGGCAGAATCTATAAGGAGAGAAATGGCACTTGAAGAGTTTTGTGCCAAGCAGACTTCTGAGATAATGCAGCTTAATCGCCTGGTGCAACAGTACAAGCATGAGATGGAATGCAATGCTATAATTGCACAGACCAGGGAAGATAAAATTCTTCGTCTTGAGAGCCTAGTGGATGGGGTTTTACCCACTGAAGAGTTCATGGTGGAAGAACAAGAGGCACTTAACCATGAACACAAGCTGTTGAAGGATAAGTACGAGAATCATCCAGAAGTTTTGAAGATGAAGATAGAGTTGAAAACTGTGCAAGATGAATTGGAAAAGTATCAAAATTTCTACAAATTTGGGGAGAGAGAAGTGCTGATGGAAGAGATACAAAGTTTGAGAAGCCAGCTTCAATTTTATATTGACTCTTCATCCACATCATCAAGGAAGCAATATCCGTTATTGCAATTGACGTACTCGTGTGATCCCAGTACGGCAGCAACCCTCACTGCCATTCCAGATTTGACCGATGAGAGAGATGAGACAAATGAAATTCTTGCATCATCCAAGAACGATATTGAAGCAAATGAAATTCTAGCATCATACAAGAAGTATAATGAAGCAAATGAAATTCTAGCATCATCCAAGAATGATATTGAAGCACAATTTGAACAAGAAAGAATTAAATGGACAGAGGCAGAAAGCAGGTGGATTTCTCTTTCTGAAGAACTTAGAGCTGAGCTAGAAAGTAGCAGGTTGCTATCTGAAAAAAGGAAGCGAGAATTAGATGCTGAGAGGCAGTGTACTCAGGAGCTTCAGGAAGCCATTCACATGGCTATAGAAGGGCATGCAAGACTTTTAGAACAATATGCAGATTTGGAAGAGAAACACATCCATTTGCTTGCAAGGCATAGACAGATCCAAGATGGAATTGAGGATGTCAAGAAAGCGGCTTCCAGAGCAGGAGTAAGAGGTGCAGAGTCCAAGTTCATAAATGCCCTTGCTGCTGAAATTTCAGCTTTAAAAGCAGAAAGAGAAAAAGAACGGAGAATCTTAAGAGATGAAAATAAGGGCCTACAGTCCCAGTTGAAGGACACTGCAGAAGCAGTACAAGCTGCTGGTGAACTGCTTTTGCGGCTTAAAGAGGCTGAAGAAACTGTCACTGCTGCACAGAAACGGGCTATGGATGCAGAACAGGAAGCTGCCAAGGCCTACAAACAAATTGACAAGTTGAAGAAGAAGCACGAGAAGGAGATTATCACACTCAATGAGCTCCTTGCAGAAGCACGTTTGCCGAAGGAATCAGTACGGCCAACTTATGATGACGATGTCGTCATGCCCAGTTATGACGACTCAAAGGAGCAAAACAGTTTTAATGATCAGTTTGAGCCATTTCACAATAATGCAGAGTATGGCGAGCTTGCAAAACTAGCAGAACCATCATGGTTCTCTGGTTATGATAGATGTAACATATAA 3861 0.4312 MKHFMLPRNPLRDAEFASSATPTPSPSSTKHRPSRKHKPSKENDPPSDPNLAVPSPAKFKSPLPPRPPSSNPLKRKLAIAADALTDNPLPAPSDSGVKVIVRMRPLCPDKDEGDPTVQKVSNDSLSINGHNFTFDSVADTVATQLDIFEHVGVPLVEHCLAGFNSSVFAYGQTGSGKTYTMWGPANCLLEENDQQGLAPRVFQQLFARINEEQTKHSDKQLNYQCNCSFLEIYNEQIMDLLDPNQKNLQIREDVKSGVYVENLSEEPVSSIKDVTQLLIKGLSNRRTGATSINSESSRSHTVLVCVVESRCKSAADGVSRFKTSRINLVDLAGSERQKSTGAAGERLKEAGNINRSLSQLGNLINILAEVSQTGKQRHIPYRDSRLTFLLQESLGGNAKLAMICAISPAQSCRSETFSTLRFAQRAKAIKNKAVVNEVMEEDVKHLRQVIRQLRDELHRMKANGYNTMDSNGGHSAAWIRRSLNLLQSSLNRPPPLPRLDEDGDEEMEIDEEGVEDHDEVSCKAIMLSNCNTVADNDNGMNTDDQDLTQPSEEKNIPGLPGSKNISEESSCEMVGNRFSCTMGESDLGSFAGFSAPDVPSDSPSAAMNCVSPASLSVVACDLSPILKSPAPSVSPRISTSCKSLRTSTGLSPSESDLHVEKDLGIKTSNKKNSYSACSSQTAPNFLNKTENLAASIRHGLEIIDSYQHNSALRQSAYRFSLGPRKSRLIFPVDKVDVGLQTSLDDDVVEDSVLFTCSNCKSRAQLDVNNTDNNSNLQLVPFDCPGFADKPKKQVLKAVEKVLAESIRREMALEEFCAKQTSEIMQLNRLVQQYKHEMECNAIIAQTREDKILRLESLVDGVLPTEEFMVEEQEALNHEHKLLKDKYENHPEVLKMKIELKTVQDELEKYQNFYKFGEREVLMEEIQSLRSQLQFYIDSSSTSSRKQYPLLQLTYSCDPSTAATLTAIPDLTDERDETNEILASSKNDIEANEILASYKKYNEANEILASSKNDIEAQFEQERIKWTEAESRWISLSEELRAELESSRLLSEKRKRELDAERQCTQELQEAIHMAIEGHARLLEQYADLEEKHIHLLARHRQIQDGIEDVKKAASRAGVRGAESKFINALAAEISALKAEREKERRILRDENKGLQSQLKDTAEAVQAAGELLLRLKEAEETVTAAQKRAMDAEQEAAKAYKQIDKLKKKHEKEIITLNELLAEARLPKESVRPTYDDDVVMPSYDDSKEQNSFNDQFEPFHNNAEYGELAKLAEPSWFSGYDRCNI* 1287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2729 1286 ProSitePatterns Kinesin motor domain signature. 324 335 IPR019821 GO:0003777|GO:0005524|GO:0007018
Pvu1g2729 1286 Coils Coil 1168 1223 - -
Pvu1g2729 1286 MobiDBLite consensus disorder prediction 534 567 - -
Pvu1g2729 1286 PANTHER CENTROMERE PROTEIN E 63 528 - -
Pvu1g2729 1286 PANTHER CENTROMERE PROTEIN E 562 1286 - -
Pvu1g2729 1286 Pfam Kinesin motor domain 114 429 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pvu1g2729 1286 Gene3D Kinesin motor domain 90 462 IPR036961 -
Pvu1g2729 1286 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 97 461 IPR027417 -
Pvu1g2729 1286 Coils Coil 816 836 - -
Pvu1g2729 1286 Coils Coil 1126 1164 - -
Pvu1g2729 1286 MobiDBLite consensus disorder prediction 1 73 - -
Pvu1g2729 1286 ProSiteProfiles Kinesin motor domain profile. 96 429 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pvu1g2729 1286 PANTHER KINESIN-LIKE PROTEIN KIN-12B 63 528 - -
Pvu1g2729 1286 PANTHER KINESIN-LIKE PROTEIN KIN-12B 562 1286 - -
Pvu1g2729 1286 Coils Coil 436 463 - -
Pvu1g2729 1286 PRINTS Kinesin heavy chain signature 162 183 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pvu1g2729 1286 PRINTS Kinesin heavy chain signature 290 307 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pvu1g2729 1286 PRINTS Kinesin heavy chain signature 325 343 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pvu1g2729 1286 PRINTS Kinesin heavy chain signature 379 400 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pvu1g2729 1286 SMART kinesin_4 94 437 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2729 Pvu-Chr1 51808537 51815269 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g2729 5 461 Miscellaneous Gene Families AT4G39050 35.699 1.09e-62 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2729 K10400 - gmx:100785790 2003.02