Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2724 ATGCCCATTTTCTCTGCAACTGCAACTTTTGCCTCCTACACTTCCATCTCCTTCCTCTCAGCTTCACAATCTCAATCACACCTTTCTCCTTTCCTCAATTTCCCCCACAAGTTTACTGTTAAGACACCTTGGCAATGGCAGCACCATCACTACCACACTCATAAACTCTTAATCTCTGCCTCTGGCAATACCCAAATTGACCAAAATCTCGAAAGTGGACTTCTTCAACGCCCTACTCCTCCAGATCCACTGGATGAAGCTCGTCTTGCTCGGAGATCATCAGATTGGAAGGCTGCAAAGGCATATAAAGATAGTGGACTCATTTATAACGGTAGGGTTGAAGGTTTTAATTCTGGAGGCCTGAGGGTTCGGTTTTATTCTATTCTGGGGTTTCTCCCATTCCCTGAATTGAGTCCAGTGCATACATGTAAAGAACCAGAGAAACCTATCCAAGAAATTGCAAAAGGCTTAATTGGTTCAATCATATCGGCAAAGGTGATTCTAGCGGATGAGGATAACAAGAAAATGATATTCTCAGAAAAGGAAGGTGCCTGGTCCAAATTTTCAAAACATGTCAATTTAGGGGACATTTTTGAAGGAAAAGTTGGTTATGTTGAGGACTATGGTGCTTTTGTTCATTTGCGGTTCCCTGACGGTCTTTATCACCTTACTGGTCTTATACACATCTCGGAGGTGTCATGGGATCTAGTTCAGGATGTCAGAGATATCTTGAAAGTAGGTGATCAAGTGAGGGCCAAAGTTATTGGTATTGATTGGATAAAATCAAGGATCACCTTATCAATTAAACAGCTAGAAGAAGATCCACTTCTAGAAACTTTGGACAAAGTAATACCTCAGGATGATTCAGCTGATCTTGATTCTCTGGGCGGTGGTGATGGTGATAGTATTGAACCTCTTCCAGGGCTTGAAACAATCCTTGAAGAGCTACAACAGGAAGATGGTATATCAGATGTAAGAATCAGCCGTCAAGGGTTTGAAAAACGAGTGGTCTCGCAGGACTTGCAACTTTGGCTTTCTAATGCACCTCCCACCAACCAAAGGTTTACTCTACTTGCTCGTGCTGGAAGACAGGTGCAGGAGATACACTTGACTACATCTCTCGATCAGGAAGGTATCAAAAAGGCATTACAACGAGTGTTGGAGCGTGTTCCCTGA 1176 0.4294 MPIFSATATFASYTSISFLSASQSQSHLSPFLNFPHKFTVKTPWQWQHHHYHTHKLLISASGNTQIDQNLESGLLQRPTPPDPLDEARLARRSSDWKAAKAYKDSGLIYNGRVEGFNSGGLRVRFYSILGFLPFPELSPVHTCKEPEKPIQEIAKGLIGSIISAKVILADEDNKKMIFSEKEGAWSKFSKHVNLGDIFEGKVGYVEDYGAFVHLRFPDGLYHLTGLIHISEVSWDLVQDVRDILKVGDQVRAKVIGIDWIKSRITLSIKQLEEDPLLETLDKVIPQDDSADLDSLGGGDGDSIEPLPGLETILEELQQEDGISDVRISRQGFEKRVVSQDLQLWLSNAPPTNQRFTLLARAGRQVQEIHLTTSLDQEGIKKALQRVLERVP* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2724 391 SUPERFAMILY Nucleic acid-binding proteins 106 181 IPR012340 -
Pvu1g2724 391 Pfam S1 RNA binding domain 193 269 IPR003029 GO:0003676
Pvu1g2724 391 PANTHER OS03G0844900 PROTEIN 3 391 - -
Pvu1g2724 391 SUPERFAMILY Nucleic acid-binding proteins 193 282 IPR012340 -
Pvu1g2724 391 SMART S1_6 193 269 IPR022967 -
Pvu1g2724 391 SMART S1_6 104 181 IPR022967 -
Pvu1g2724 391 ProSiteProfiles S1 domain profile. 106 181 IPR003029 GO:0003676
Pvu1g2724 391 ProSiteProfiles S1 domain profile. 195 269 IPR003029 GO:0003676
Pvu1g2724 391 Gene3D - 96 184 IPR012340 -
Pvu1g2724 391 Gene3D - 190 278 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2724 Pvu-Chr1 51774769 51779791 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2724 - - gmx:100798303 620.928