Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2722 ATGGGCATGGAAACTGTCTCTTCCAATCCCATAGAGTGTCTGGGAAAAGGGTTCGATTTCACCAGTGATTTCAGGTTGAAGTTTGCCAAGGGACAAGGAAGACGAAGATTGGTGGTTGTTGACGAAGAGAACAAGAGGAACATTACTGTTCCTGGTACTGCTGCTACCATTCCCAATGTTTCCCAGGATATCAGCTGTGACAAGGGGGATAGTCTTCGTTTCAAATCTCATGTTCTTCAATTCAACCAGATGTCTGAGTTGCTAAATCAAAAGTGTGCAATACAAGGAAAAATTCCTTCTGGCTATTTCAATGCTCTTTTTGATCTGAGTGGTGATTGGTATCGTGATGCTCATAACATCAAGTATCTTGCTTTTGATGCTTATTTCATTTCCCTCTACTATTTCCACCTTACTGCTTCACACCTCATTCTGCAAGACGAAGTCAAAAACTCTGTTCCACCTCAGTGGGACCCTGCTTCATTAACCAGGTTCATTCAAACATATGGAACACACATAATAACAGGTATGGCTGTTGGAGGTCAAGATGTAATATGTGTCAAACAAAAGCATTCTTCAAAGGTTTCACCTGCTGATCTAAGAAGACATTTAGAGAATCTAGGAGATTTTTTGTTTCAAGATTTAAGAAGCCCTTCTCAACAACAGCCAAACACCTCCACAGAAGCCAAACAAAAGGTTCCTGAGGTCTTCAATCAAGTGATGCAATCAAACACAACGCAGTTCACCAGCATTTCAGAAACCTCAAGCAAGGATGGCCTCAGTATCATCTGTTCAAAAAGAGGAGGAGATGTGTTCAAGCACGGTCACTCAAATTGGCTCCAGACAGTGGCTTCTAATCCTGAAGCTATCCTCTTCAAGTTTGTGCCTATTTCATCACTTCTCACAGGAATTCCTGGAAGCGGCTATCTTAGTCATGCAATCAATTTGTATTTACGCTATAAGCCCCCTCCCGAAGATTTACAATGCTTCTTGGAGTTTCAAATTCCAAGGCAATGGGCACCCATGTTTTATGAGCTACCTCTGAGGCATCAAAGGAAAAAGAGTACTTCCCCTTCCCTGCAATTTGGTTTCATGTCTCCCAAGCTTCATGTCAGTTCTGCACAGGTAGTGAGTGAAGAAAAGCCTGTGGTAGGCCTCCGTCTGTACTTGGAGGGAAGAAAATGTGATAGACTTGCAATACACGTACACCATCTTTCAAGCCTCCCAATCCCAAAGACAATGATCCACTCTTCAGGCGCATCATTGTGGCGAGGATCTGATGATAACGAATCCTGTGACACCTTTCTGGAACCAATAAGGTGGAAGGGATTTGCAAACGTGTGCACTGCAGTGGTTAAACATGACCCTAACTGGTTGCATGAATCAGGTGTTGATGGTGGTGTTTACATTGTAACTGGTGCACAGCTCATAAGCAAAGGGAATTGGCCAAAGAATGTGCTTCACCTGCGCCTACAATATACCCACATATCCAATTGCAGTATCAGGAAGTCAGATTGGGATGGTGCACCAGAGGCTTCAAGAAAATCATCTTTCCTCACAAATTTAAGCACAACATTTTCATTCACACAGCAAAGTGTCTCTGCTGCTCCTCAGAAGCAGGCTCCAACTGCACTTGACTCTGGTGTTTATCCAGATGGTCCACCTGTGCCTGTTCCTTCTGGAAAACTGCTTAGATATGTGGATACAAGTGAGGTTCTGAGGGGGCCACATGATGTTCCTGGACATTGGTTGGTAACAGCTGCTAAGCTTGTGACTGAGGGTGGTAAGATTGGATTACAGGTCAAGTTTGCACTGTTAGACTACTACTAG 1827 0.4357 MGMETVSSNPIECLGKGFDFTSDFRLKFAKGQGRRRLVVVDEENKRNITVPGTAATIPNVSQDISCDKGDSLRFKSHVLQFNQMSELLNQKCAIQGKIPSGYFNALFDLSGDWYRDAHNIKYLAFDAYFISLYYFHLTASHLILQDEVKNSVPPQWDPASLTRFIQTYGTHIITGMAVGGQDVICVKQKHSSKVSPADLRRHLENLGDFLFQDLRSPSQQQPNTSTEAKQKVPEVFNQVMQSNTTQFTSISETSSKDGLSIICSKRGGDVFKHGHSNWLQTVASNPEAILFKFVPISSLLTGIPGSGYLSHAINLYLRYKPPPEDLQCFLEFQIPRQWAPMFYELPLRHQRKKSTSPSLQFGFMSPKLHVSSAQVVSEEKPVVGLRLYLEGRKCDRLAIHVHHLSSLPIPKTMIHSSGASLWRGSDDNESCDTFLEPIRWKGFANVCTAVVKHDPNWLHESGVDGGVYIVTGAQLISKGNWPKNVLHLRLQYTHISNCSIRKSDWDGAPEASRKSSFLTNLSTTFSFTQQSVSAAPQKQAPTALDSGVYPDGPPVPVPSGKLLRYVDTSEVLRGPHDVPGHWLVTAAKLVTEGGKIGLQVKFALLDYY* 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2722 608 PANTHER MACPF DOMAIN-CONTAINING PROTEIN CAD1 6 607 IPR044663 GO:0006952|GO:0012501|GO:2000031
Pvu1g2722 608 SMART MACPF_8 120 318 IPR020864 -
Pvu1g2722 608 Pfam MAC/Perforin domain 103 316 IPR020864 -
Pvu1g2722 608 ProSiteProfiles Membrane attack complex/perforin (MACPF) domain profile. 1 330 IPR020864 -
Pvu1g2722 608 PANTHER OS02G0475300 PROTEIN 6 607 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2722 Pvu-Chr1 51763483 51769335 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2722 - - vun:114162687 1097.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2722 1 51763483 51769335 Pvu2g1769 2 31885171 31891238 PCT