Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2711 ATGGAAGGGGTGGCCATGCTGAAGCAGCTAATTGGTCAGCTTCAGCAGCTCTTGGACTCTTCCCATTCCCATTCTCTCATTCTTCAACCTTCTCACAACACTCTTCTCTTCCATCAACAACAACAACAACACCAACACCAACAACAGCAACATCCCAGATGGACCTCCCTTGACATTGAAGATAGCTCTGTAGATGACTTTTGTGGCCTTGTAGTGACAGCAGGAAAGTCTGGCAGTTTCAGGATGTCAGAACCTGTGAAGCCTCCACCTACTAAGAAGTCTCGTAGAGATAGAAGCAGGGGAAAATCATCTGGACGATCCTGTTCAGCTGAAGTCATGGAACAAGAAATTTGGAAAAATTTCCCTGAAGATTTATTTGAGGCTGTGATTGCGCGACTTCCCATTGCTACATTTTTCCGCTTCCGCTCTGTATGCCGGCAGTGGAATTCCATGCTGACTTCTCAAAGTTTTTCTCAGCATTGTACTGAAGTTACACAAGCAAATCCATGGTTTTACACCATTACCCATGAAAACGTGAATTCGGGAGCTATGTACGACCCTTCTTTGAAAAAATGGCACCACCCAACTATATCAACACCGCCCACAAAATTGATTGTTTTACCCGTGGCTTCTGCTGGTGGTTTAGTTTGCTTTCTTGACATTGGTCATCGGAACTTCTTTGTTTGTAACCCACTGACTCAATCCTTCAAGGAGTTGCCAGCTCGATCAGTTAAGGTCTGGTCTCGTGTTGCTGTAGGGATGACAATAAATGGAAACTCAGCTGGTTCAGGCTACAAGATCTTATGGGTGGGTTGTGATGGGGAATATGAAGTTTATGACTCAGTCAGAAATTCTTGGATACGTCCTGGAAACATGCCTGCAGGTATGAAGCTGCCACTGTCGCTCAACTTCAGGTCTCAAGCTGTCTCTATTGATAGCATGCTTTACTTCATGCGATCAGACCCAGAAGGGATTGTTTCTTATGATATGGCAACTGGGGTTTGGAAACAATATATAATCCCAGCGCCATTGCATCTGACGGATCACACTCTGGCCGAGTGTGATGGCCAGATCATGCTTGTGGGTTTGCTCACAAAGAATGCAGCTACTTGTGTATGCATATGGGAGCTGCAGAAAATGACACTATTGTGGAAGGAGGTTGACAGAATGCCAAACATATGGTGCTTGGACTTTTATGGGAAGCACGTTAGAATGACTTGCCTGGGGAACAAAGGCTTGCTCATGTTGTCACTGAGATCGAAACAAATGAATAGATTGGTTACTTACAACATAGCAAGGAAAGAATGGCTGAAGGTTCCTGGGTGTGTGGTGCCGCGTGGGAGAAAACGACAGTGGATAGCTTGTGGTACTGCATTTCATCCATGCCTGACAGCGGTGGCATGA 1404 0.4544 MEGVAMLKQLIGQLQQLLDSSHSHSLILQPSHNTLLFHQQQQQHQHQQQQHPRWTSLDIEDSSVDDFCGLVVTAGKSGSFRMSEPVKPPPTKKSRRDRSRGKSSGRSCSAEVMEQEIWKNFPEDLFEAVIARLPIATFFRFRSVCRQWNSMLTSQSFSQHCTEVTQANPWFYTITHENVNSGAMYDPSLKKWHHPTISTPPTKLIVLPVASAGGLVCFLDIGHRNFFVCNPLTQSFKELPARSVKVWSRVAVGMTINGNSAGSGYKILWVGCDGEYEVYDSVRNSWIRPGNMPAGMKLPLSLNFRSQAVSIDSMLYFMRSDPEGIVSYDMATGVWKQYIIPAPLHLTDHTLAECDGQIMLVGLLTKNAATCVCIWELQKMTLLWKEVDRMPNIWCLDFYGKHVRMTCLGNKGLLMLSLRSKQMNRLVTYNIARKEWLKVPGCVVPRGRKRQWIACGTAFHPCLTAVA* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2711 467 MobiDBLite consensus disorder prediction 79 108 - -
Pvu1g2711 467 PANTHER BNAA07G08860D PROTEIN 56 466 - -
Pvu1g2711 467 SUPERFAMILY Galactose oxidase, central domain 182 448 IPR011043 -
Pvu1g2711 467 Pfam F-box domain 118 157 IPR001810 GO:0005515
Pvu1g2711 467 SMART fbox_2 121 161 IPR001810 GO:0005515
Pvu1g2711 467 Gene3D - 171 454 IPR015915 GO:0005515
Pvu1g2711 467 PANTHER F-BOX/KELCH-REPEAT PROTEIN 56 466 - -
Pvu1g2711 467 Gene3D - 118 157 - -
Pvu1g2711 467 ProSiteProfiles F-box domain profile. 115 160 IPR001810 GO:0005515
Pvu1g2711 467 SUPERFAMILY F-box domain 113 193 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2711 Pvu-Chr1 51701510 51706015 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2711 - - gmx:100810179 838.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2711 1 51701510 51706015 Pvu2g1782 2 32197851 32201666 PCT