Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2705 ATGTACGTCTCCGAGAACAACCGCGATGATTCTGATCGAACCGCTTTCAGAAAAGCAGAGAAGAAATACAAGCTCTACTACGACAACAATGCTTCTTCCAAGAACAAAAAGAAAAAACAACCTAAACCCGTGGATTTGACGGAGGTTCTTGACTTCAGATCCATTCTAGAATGCTATCTTCGGAACGGTGCGCTTCCTCCGGGTGTTATCGTTCTCCATGAGAACTTCACCTCTCCAGTTTTCTCTTTGCAAAATCGCCCAGGCTTTTATTTTATTCCTGGGGCATTAACCATGGAGAAACAATGTAGTTTGATAAGGGAGAGTTTGACTGATTTTCCGCAGCCACCTAACAGAACAAATCACAATGCCATGTATGGTCCAATTCAGGATGTTTTTGGTGCTGCTAAGGAAGGGAAGGTTTTGGTTGAAGACAACTCTCCAAATTCTTCATCAGAAACTGATGCTGATGTAGATCATGGAGATTGTAAGGAATGGAAATTTGCTACCCAAAAGGAAGTGTTGTTGAGAAAATGCAAATCCGTTTCTGCTTCAACGTTGCTTCGGAAGTTGCGATGGAGCACTCTGGGCCTGCAGTTTGATTGGTCCAAGCGGAATTACGATATGTCTCTCCCACATAACAAAATCCCTGAAGCACTGTGTGAACTTGCCAAACAATTGGCCAAGTCTGCTTTGCCTGCTGGGGTTGAATTCAATCCTGAAGCTGCAATTGTGAATTACTTTGGTTTAGGGGACACACTGGGTGGTCACCTTGATGACATGGAAGCAGATTGGAGCAAGCCTATAGTTAGTTTAAGTCTGGGCTGCAAGGCTATATTTCTTTTGGGAGGAAAATCCAGAGAGGATTCTCCCCTGGCAATGTTCCTGCGAAGCGGCGATGTTGTTCTTATGGCTGGAGATGCAAGGGAATGCTTTCATGGCGTTCCTCGAATCTTCACAGATGAAGAAAATGCTGAAATAGGCCATCTTGAGAAACAGCTGACACATGAAGAGGATCTTTGTTTCTTACAATACATCCAAACTTCTAGAATCAACATTAACATCAGACAAGTTTTTTGA 1077 0.4327 MYVSENNRDDSDRTAFRKAEKKYKLYYDNNASSKNKKKKQPKPVDLTEVLDFRSILECYLRNGALPPGVIVLHENFTSPVFSLQNRPGFYFIPGALTMEKQCSLIRESLTDFPQPPNRTNHNAMYGPIQDVFGAAKEGKVLVEDNSPNSSSETDADVDHGDCKEWKFATQKEVLLRKCKSVSASTLLRKLRWSTLGLQFDWSKRNYDMSLPHNKIPEALCELAKQLAKSALPAGVEFNPEAAIVNYFGLGDTLGGHLDDMEADWSKPIVSLSLGCKAIFLLGGKSREDSPLAMFLRSGDVVLMAGDARECFHGVPRIFTDEENAEIGHLEKQLTHEEDLCFLQYIQTSRININIRQVF* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2705 358 PANTHER ALKYLATED DNA REPAIR PROTEIN ALKB-RELATED 1 358 IPR004574 -
Pvu1g2705 358 Pfam 2OG-Fe(II) oxygenase superfamily 171 355 IPR027450 -
Pvu1g2705 358 Gene3D - 147 357 IPR037151 -
Pvu1g2705 358 PANTHER ALPHA-KETOGLUTARATE-DEPENDENT DIOXYGENASE ALKB 1 358 - -
Pvu1g2705 358 SUPERFAMILY Clavaminate synthase-like 87 357 - -
Pvu1g2705 358 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 238 358 IPR005123 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2705 K10765 - gmx:100811774 635.565
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2705 1 51664062 51666699 Pvu1g2705 1 51664062 51666699 ECH