LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pvu1g2700	ATGGTCGTTGCACAGAAAGTCAAGGAAGCTGAAATCACCGAGCAGGATTCACTTCTTCTCACGAGGAATCTGCTTCGAATTGCCATATTCAATATCAGTTATATCAGAGGACTATTTCCTGAGAAGTATTTCAATGATAAGTCCGTTCCTGCTTTAGAGATGAAGATAAAAAAACTGATGCCACTGGATGCCGAGTCTCGCAGACTAATTGATTGGATGGAGAAAGGTGTGTACGATGCCTTACAGAAGAAATATCTGAAGACGCTTCTGTTCTGTGTGTGCGAAGCAGTGGACGGACCAATGATTGAGGAATATGCATTTTCCTTCTGCTATTCCGATTCTGACAACCAAGAGGTTTCAATGAACATCAACCGCACTGGAAACAAAAAGAACCGGGGGGGCTTCAAGTGTAACTCGACTGCAGAAATTACTCCCCAACAGATGAGGAGTTCTGCGTGTAAAATGATCCGTACTCTAGTTCAGTTGATGAGAACTCTGGAGAAAATGCCAGAAGAGCGTACCATTCTGATGAAGCTCCTCTACTACGATGATGTGACGCCTGCAGATTATGAGCCTCCTTTCTTCCGGGGCTGCACAGGTGAAGAAGCTTACCATCCATGGGAGAAAAATCCTTTGAAAATGGAGGTTGGGAATGTAAACAGCAAGCACTTCGTATTAGCTCTGAAGGTGAAGAGTGTACTCGACCCTTGTGAGGATGATAACGAGGGAATCCCGGACGATATGAGCAATGGCGATGATTCAATGCAACAGAATGAGTATTATGATACTGACAGTGAGGTTGATCTCACTCAAGGGAATCGATATGTAGTTGCTCCAATAGATAAACAGCAACAACAGGAAGACAATAGCATGATTGATGAAGACAATACACAGGATCCGGTGGAAGATGAGCAACAACAGGTCCGGGTCAAGGAGTGGATCAACTGTTGTCACCGTGACACAATTGAACTTACTGATGTTCTATCGAATTTTCCAGACATCTCCGTGATCATGGATAAGCTTGTTGAGGAAGGTGTGCTGTCGAAGATAGGGAAGGAATCCTACGCCATTAACAAGGACAAGAACCTTGAATATGAGTTCACCATTGTGAAAGAAGAAATCGACGGTCAACTTCCTAAAGTCTTTGACAGAGCTTTGCAACTTGAAGATCGCTTATACATGAAAGCTCTCTATCATGCTCTTCCGATGACGCACGTGTCAATGGGTAAGCTTCAAATTTTGCTTGAGGGGGAAGTAAACCAGACAGCAGCTCGAAAGATAATTGATAAAATGGTGCGGGATGGGTTTGTTGAACCCAAAGGCAACAAAAGATTAGGGAAACGTGTTATCCATTCTGAGTTGACTGAAAGGAAATTCATTGAAGTCCAGAAAGCTCTAAGTGCTACGGAGGCTATGGATGTTGATCACTGTGAACCAAATAGCAAGTCCAAATTAACTGGTTTTCGTTTAAATGGAAACAACCATGACGTGTCTACATGTGGGGTTCTTCACTCCATTGGATCAGATTTAACACGAATGAAAGTGACATCAGAGACGAACTACACTGACTCCGGGAATGGACAGAACCCAACAAAAGCCAAAGAGCCCGGAAACACCCCCATAAGCAGGCCTGTTATTTCAAGAGAGAGTTTCGCGGTAGGCAAAGAGAATGACAGAACAAACGGAATTGCAAATCAAGGAGACGAAGGTGATACAATTATATGCAGCAAGTCTTCCCAAGAGAAACGGTCAAGGAAAACTAGCGCGGTGAAGGAGCCTATCCATCAAAATATCAAGCGACAGAAATCCGAGGTCCTGTGA	1821	0.4371	MVVAQKVKEAEITEQDSLLLTRNLLRIAIFNISYIRGLFPEKYFNDKSVPALEMKIKKLMPLDAESRRLIDWMEKGVYDALQKKYLKTLLFCVCEAVDGPMIEEYAFSFCYSDSDNQEVSMNINRTGNKKNRGGFKCNSTAEITPQQMRSSACKMIRTLVQLMRTLEKMPEERTILMKLLYYDDVTPADYEPPFFRGCTGEEAYHPWEKNPLKMEVGNVNSKHFVLALKVKSVLDPCEDDNEGIPDDMSNGDDSMQQNEYYDTDSEVDLTQGNRYVVAPIDKQQQQEDNSMIDEDNTQDPVEDEQQQVRVKEWINCCHRDTIELTDVLSNFPDISVIMDKLVEEGVLSKIGKESYAINKDKNLEYEFTIVKEEIDGQLPKVFDRALQLEDRLYMKALYHALPMTHVSMGKLQILLEGEVNQTAARKIIDKMVRDGFVEPKGNKRLGKRVIHSELTERKFIEVQKALSATEAMDVDHCEPNSKSKLTGFRLNGNNHDVSTCGVLHSIGSDLTRMKVTSETNYTDSGNGQNPTKAKEPGNTPISRPVISRESFAVGKENDRTNGIANQGDEGDTIICSKSSQEKRSRKTSAVKEPIHQNIKRQKSEVL*	607

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pvu1g2700	606	MobiDBLite	consensus disorder prediction	559	574	-	-
	Pvu1g2700	606	MobiDBLite	consensus disorder prediction	237	258	-	-
	Pvu1g2700	606	MobiDBLite	consensus disorder prediction	575	606	-	-
	Pvu1g2700	606	Pfam	HORMA domain	17	223	IPR003511	-
	Pvu1g2700	606	PANTHER	MEIOSIS-SPECIFIC PROTEIN ASY1	6	593	-	-
	Pvu1g2700	606	SUPERFAMILY	The spindle assembly checkpoint protein mad2	11	237	IPR036570	-
	Pvu1g2700	606	MobiDBLite	consensus disorder prediction	281	301	-	-
	Pvu1g2700	606	ProSiteProfiles	HORMA domain profile.	15	230	IPR003511	-
	Pvu1g2700	606	MobiDBLite	consensus disorder prediction	518	606	-	-
	Pvu1g2700	606	PANTHER	CYSTEINE PROTEASE FAMILY C1-RELATED	6	593	-	-
	Pvu1g2700	606	Gene3D	HORMA domain	5	276	IPR036570	-
	Pvu1g2700	606	MobiDBLite	consensus disorder prediction	518	536	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pvu1g2700	K12778		-	gmx:100792473	1095.88

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Pvu1g2700	1	51626944	51632167	Pvu1g2700	1	51626944	51632167	ECH