Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2699 ATGCAAGCTAAGAAAAAAACCTCTAGGCGAAATGCCAGTCAAGAGCGTGGCAGTCGTAAGGTTTCAAGAGCACAGAGGAAGGTATCTGAGAATGGAGGATCTGCTGAAAAGAAAGTGTCAGACCTGATTACATCATCTGCTAGAAAGAATAAATCTTTTAGCACTCTTGAGAATAAAGCTATAGAGTCCATCCCCCCAACACATTTGAATTATGGATGCGAGTTTGTGGACAGTGGGACTTCCAATCTTTGTTTGGAAAATGATGCAGTTGACGGTGTTTCTCTGGATTTTATGGGTTGTAACAATCAAGCTGCCCTTCTTGAGTCTGGAACTATATTTTCTCCTGGGTTTCACTTATCCAAAAATCCTGGAGGAAAAGTTGTTGACAGAGTTGATTTTATAAAAATTTTTCAGAATGAAGAACACAAGAGAATTTCTCCATGCCAAGAAATAAAGTTACCCCAGGAAGATACAGTAGATGGTCCTGGCAGTCAAGACTTTGACACTGCAATGGAGGTAGACATGAACAATTCATCCAACTACTCTAATTCAGCCATATATCTTGCCATGAAGAACTCGAAGCTAGAATGTGTTGACGAGCATGGTCAGGACCCCATGTCTTCTGAAATATGCACAGAGGAGGATGAGTTCGAGGATTTTGACCCATACTTATTCATAAAGACCTTACCGGACTTGTCCACCGTGGTTCCAACTTTTAGACGATTGTTGTTACCTAAGCAGACACGTAGTTGCCCTTCTACTACTCTTGTTCTGGATTTGGATGAAACTTTGGTGCATTCTACCCTGGAACCTTGTGAGGATGTGGACTTCACTTTTCCGGTTAATTTCAATTGTGAGGAGCACATTGTCTATGTACGCTGCCGCCCTCATCTCAAAGATTTCCTTGAGAGAGTTTCTGGTCTTTTCGAGATTATTATATTTACAGCCAGTCAAAGTATTTATGCTGAGCAACTTCTAAACGTTCTTGATCCAAAGCGGAAGATATTTCGCCACCGTGTATACCGTGAGTCCTGTGTTTATGTGGAGGGGAATTATCTCAAAGATTTGACAGTGCTGGGTCGTGATTTGGCACACGTTATGATAATTGACAATTCCCCTCAGGCATTTGGATTCCAGGTGGATAATGGAATACCGATTGAGAGTTGGTTTGAAGATCGTTCAGATCGAGAATTGCTTTCGTTACTTCCCTTTTTGGAGAGCTTGGTGGGTGTTGATGATGTCCGGCCACTAATTGCAAAGAAATTCAACCTGCGGGAGAAAATTGCTGCAGCTGTGCATCCTCTAAATACAAATAGAAGAGATTTCTTATCAGAATGA 1338 0.4155 MQAKKKTSRRNASQERGSRKVSRAQRKVSENGGSAEKKVSDLITSSARKNKSFSTLENKAIESIPPTHLNYGCEFVDSGTSNLCLENDAVDGVSLDFMGCNNQAALLESGTIFSPGFHLSKNPGGKVVDRVDFIKIFQNEEHKRISPCQEIKLPQEDTVDGPGSQDFDTAMEVDMNNSSNYSNSAIYLAMKNSKLECVDEHGQDPMSSEICTEEDEFEDFDPYLFIKTLPDLSTVVPTFRRLLLPKQTRSCPSTTLVLDLDETLVHSTLEPCEDVDFTFPVNFNCEEHIVYVRCRPHLKDFLERVSGLFEIIIFTASQSIYAEQLLNVLDPKRKIFRHRVYRESCVYVEGNYLKDLTVLGRDLAHVMIIDNSPQAFGFQVDNGIPIESWFEDRSDRELLSLLPFLESLVGVDDVRPLIAKKFNLREKIAAAVHPLNTNRRDFLSE* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2699 445 MobiDBLite consensus disorder prediction 8 34 - -
Pvu1g2699 445 Pfam NLI interacting factor-like phosphatase 255 415 IPR004274 -
Pvu1g2699 445 PANTHER INTERACTING FACTOR, PUTATIVE, EXPRESSED-RELATED 1 432 - -
Pvu1g2699 445 MobiDBLite consensus disorder prediction 1 41 - -
Pvu1g2699 445 CDD HAD_FCP1-like 255 386 - -
Pvu1g2699 445 SMART forpap2 252 396 IPR004274 -
Pvu1g2699 445 ProSiteProfiles FCP1 homology domain profile. 249 408 IPR004274 -
Pvu1g2699 445 Gene3D - 239 423 IPR023214 -
Pvu1g2699 445 SUPERFAMILY HAD-like 243 419 IPR036412 -
Pvu1g2699 445 PANTHER NUCLEAR LIM INTERACTOR-INTERACTING FACTOR-RELATED 1 432 - -
Pvu1g2699 445 TIGRFAM HIF-SF_euk: dullard-like phosphatase domain 254 417 IPR011948 GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2699 Pvu-Chr1 51621667 51626023 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2699 K17616 K12778 gmx:100798665 758.059
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2699 1 51621667 51626023 Pvu1g2699 1 51621667 51626023 ECH