Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2691 ATGTCGTTGGCATCGTCGTTCTCCATGCTCCGGCATCGCGCGGTGGCTTCCGCCGCACCATTCCTCCTGCGCCGCTTCCGGTGCCTTCCAATCGCCGCCCGGCAGCAGCAAAACCCTAACAAGCAAGCCGCCCCGAGCCGCAACCTTCTGAAGGCGAAGAAAACGTTGAAGGAGTTTTCCTCTCTCGCCCCTGTCCTCTCCCTGGAAGACAGCCCCCCGCTCACGGAATCCCAGGCCATCGGCGTCGTGGCGGCGTCGCAGGCGAACTTCATGCGCGTCATCGTTCCCGAAAACGACCAGCCTCCTTCTTCTGGAAGCTTCCGCGGGGTGGAGCTTCTCTGCGTGGTGAGGGCGCTACTGAAGAAGATTAAGCGCAGGGTCATGGTCGGGGACAAGGTTCTTGTCGGTTCCGTGGATTGGGTGGATCGTAGGGGATGGATTGAAAACGTCTTCCACCGGTCCTCTGAGATTCTTGACCCTCCCGTTGCCAACGTCGACCACCTTCTCGTGCTGTTCTCGCTCGATCAACCCAGGCCTGAACCGTTTACCCTCACGCGCTTTCTTGTCGAAGCTGAATCCACTGGAATCCCTATCACGCTGGCACTCAACAAGACCGAGCTTGTGGATAAAGAGATCATTAGTTCGTGGAAGTCCAGGCTGCGCAGCTGGGGGTATGAGCCGGTTTTTTGCAGCGTTGAATCTGGACATGGACTTGATCTTCTTGCATTCCAGTTGAGGGATCAAACGACAGTGATTGTGGGGCCTAGTGGAGTTGGGAAGTCTAGTTTGATAAATGCCCTTAGAAGCAATTCTTCTGATGTTGCGGAAGGGGAGAACTGGTTTGAGCCTATTTCGGGAAGCAAGTGGCTTGAGGATCAACGGGTTGGGGAGGTTTCCACGAGAAGTGGTAGAGGAAAGCATACTACTCGCCATGTTTCTTTGCTTCCAATATCTGGAGGGGGGTTTCTTGCTGATACTCCTGGATTTAATCAACCTAGTTTATTGAAAGTTACAAAGCAGTCTCTTGCACAGACTTTTCCTGAAATCAGGAAAATGCTTAGTGCGAATGAGACTGAGAAATGCTCATTTAACAATTGCTTGCATCTGGGAGAACCTGGGTGCATTGTGAAGGGAGATTGGGAAAGATATTCATTCTATTTTCAACTTCTGGATGAAATCAGAATCAGGGAAGAGTTCCAACTCAGGACATTTGGGACTAAAAGAGAAGGGGATGTAAGGTTGAAAATGGGAGATATGGGTGTTCAGCAAGCAGAACCACGGTTGGAACCTAAAAAGCACAGGAGACAATCTCGAAAGAGCATTAACCAGTCAATTTTAGATGACATAGATGATGATGACGTCGACAATTTGCTTGATGAGGAAAATGATCCCATTTTAAGGGCGCTACGAAATGAAAACTCTTAG 1425 0.5067 MSLASSFSMLRHRAVASAAPFLLRRFRCLPIAARQQQNPNKQAAPSRNLLKAKKTLKEFSSLAPVLSLEDSPPLTESQAIGVVAASQANFMRVIVPENDQPPSSGSFRGVELLCVVRALLKKIKRRVMVGDKVLVGSVDWVDRRGWIENVFHRSSEILDPPVANVDHLLVLFSLDQPRPEPFTLTRFLVEAESTGIPITLALNKTELVDKEIISSWKSRLRSWGYEPVFCSVESGHGLDLLAFQLRDQTTVIVGPSGVGKSSLINALRSNSSDVAEGENWFEPISGSKWLEDQRVGEVSTRSGRGKHTTRHVSLLPISGGGFLADTPGFNQPSLLKVTKQSLAQTFPEIRKMLSANETEKCSFNNCLHLGEPGCIVKGDWERYSFYFQLLDEIRIREEFQLRTFGTKREGDVRLKMGDMGVQQAEPRLEPKKHRRQSRKSINQSILDDIDDDDVDNLLDEENDPILRALRNENS* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2691 474 PANTHER SMALL RIBOSOMAL SUBUNIT BIOGENESIS GTPASE RSGA 69 454 IPR004881 GO:0003924|GO:0005525
Pvu1g2691 474 PANTHER SMALL RIBOSOMAL SUBUNIT BIOGENESIS GTPASE RSGA 1, MITOCHONDRIAL-RELATED 69 454 - -
Pvu1g2691 474 Hamap Small ribosomal subunit biogenesis GTPase RsgA [rsgA]. 79 397 IPR004881 GO:0003924|GO:0005525
Pvu1g2691 474 Gene3D - 74 151 IPR012340 -
Pvu1g2691 474 Gene3D - 152 334 IPR027417 -
Pvu1g2691 474 ProSiteProfiles Circularly permuted (CP)-type guanine nucleotide-binding (G) domain profile. 154 332 IPR030378 GO:0005525
Pvu1g2691 474 MobiDBLite consensus disorder prediction 424 445 - -
Pvu1g2691 474 Pfam RsgA GTPase 150 334 IPR010914 GO:0003924|GO:0005525
Pvu1g2691 474 CDD YjeQ_EngC 163 391 IPR004881 GO:0003924|GO:0005525
Pvu1g2691 474 Gene3D Probable gtpase engc; domain 3 336 398 - -
Pvu1g2691 474 ProSiteProfiles EngC GTPase domain profile. 163 330 IPR010914 GO:0003924|GO:0005525
Pvu1g2691 474 SUPERFAMILY Nucleic acid-binding proteins 79 153 IPR012340 -
Pvu1g2691 474 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 157 393 IPR027417 -
Pvu1g2691 474 TIGRFAM TIGR00157: ribosome small subunit-dependent GTPase A 127 272 IPR004881 GO:0003924|GO:0005525
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2691 K06949 - gmx:100796145 843.188
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2691 1 51580507 51583778 Pvu1g2691 1 51580507 51583778 ECH