Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2685 ATGCCACAGCCAGAAAAATCGCTCGGCATTCCAGGAGACGGTAGATGTTTGTTTAGGTCTGTGGTGTATGGTGCATGTCTCAGATCAGGTGAACCATCTCCAAGTCTTAGTAGGCAAAAGGAACTTGCAGATGAACTTAGAGCCAAAGTTGTGGATGAATTCATCAAGAGGAGGGCAGATACTGAATGGTTTCTAGAAGGTGACTTCGAAACATATACAGTGCAGATGCGAAAGCCTCACATATGGGGAGGAGAACCTGAACTTCTCATGTCCTCACATGTTCTACAGATGCCTATAACAGTGGTCATGCAGGATAAGAATTCAAGTAACCTTAAAGTTATAGCTGAATATGGTGAGGAATATGGGAAGGATAACCCTATTCGAGTGATTTATCATGGTTATGGCCACTATGATGCATTATTGAAGACTTCCACTGGTTTTGTGCAGTCTTAG 453 0.4283 MPQPEKSLGIPGDGRCLFRSVVYGACLRSGEPSPSLSRQKELADELRAKVVDEFIKRRADTEWFLEGDFETYTVQMRKPHIWGGEPELLMSSHVLQMPITVVMQDKNSSNLKVIAEYGEEYGKDNPIRVIYHGYGHYDALLKTSTGFVQS* 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2685 150 SUPERFAMILY Cysteine proteinases 9 143 IPR038765 -
Pvu1g2685 150 PANTHER OTU DOMAIN CONTAINING PROTEIN 8 141 - -
Pvu1g2685 150 ProSiteProfiles OTU domain profile. 5 143 IPR003323 -
Pvu1g2685 150 Gene3D - 5 149 - -
Pvu1g2685 150 Pfam OTU-like cysteine protease 11 137 IPR003323 -
Pvu1g2685 150 PANTHER OS09G0487700 PROTEIN 8 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2685 Pvu-Chr1 51549187 51552235 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2685 K18342 - gmx:100792132 283.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2685 1 51549187 51552235 Pvu1g2685 1 51549187 51552235 ECH