Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2683 ATGAAACTAAGTCCAAGGGAGATCCAGAAACTGGACCTGCACAATGCTGGCTACCTTGCACAGAAACGCCTTGCTCGCGGTTTAAGGCTCAATTATGTTGAAACTGTGGCTCTCATAGCAACACAGATTTTGGAATTTGTTCGTGACGGTGAGAAGAGTGTTGCAGAGTTAATGTCCATTGGGAGAGAACTTCTGGGAAGGAGACAAGTTCTTCCATCTGTTCCACATCTTGTGGAAAGTGTTCAGGTTGAAGGCACCTTTCGTGATGGGACTAAGTTAGTCACCATTCATGACCCAATCGTTCGTGAGAATGGAAACCTTGAACTTGCATTATTTGGTTCTTTTCTTCCAGTACCTTCACTTGACAAGTTTGCAGAGAACGAAGAAGATCATAGATTTCCTGGAGAAATAATATTTAGAAGTGAAAGTCTGATTCTTAACCATGGAAGGAAAGCGATAATTCTCAAAGTTGTCAACAATGGAGACAGGCCAATTCAGGTTGGAAGCCACTATCATTTTATTGAAGTAAATCCTTCCTTAGCCTTTGATAGAAAGAAAGCATATGGCATGCGCCTCAATATAGCAGCTGGGAATGCCACACGCTTTGAGCCAGGGGAATGTAAAAGTGTTGTACTTGTCAGCATTGGAGGCAGCAAAGTCATCAGAGGAGGTAATAACTTTGTTGATGGTCCAGTTAATGATTCCAATATCTTAGCAGCCATGGAGGCTGTGCCCAGGGGACATACAGAAGAGGAAGATGCAAGGGTAGGTATTACTGGACAAGACTATTTACTCACCACAGTAATTACTCGAGAGGAATATGCTAACAAGTATGGCCCTACAACTGGCGACAAAATCCGTCTTGGTGATACTGACTTGTTTGCTGAAATTGAAAAAGATTTTGCTGTCTATGGTGATGAATGTGTTTTTGGAGGTGGGAAAGTCATAAGAGATGGAATGGGTCAATCGTGTGGTCATTGTCCTGAGCATTCCTTGGATACTGTTATAACAAATGCTGTGATAATTGATTATACTGGAATTGTCAAAGCAGATATTGGAATTAAAAATGGATTGATTTTCTCAATTGGAAAAGCAGGAAATCCATGCATTATGAATGATGTATGTCATAAAATGACAATTGGGGCTAATACTGAAGTTATTGCTGGAGAGGGCTTGATTTTGACAGCTGGGGCTATAGATTGTCATGTTCATTTTATATGCCCTCAGTTAGTACATGAGGCCGTAACAAGTGGTATCACAACACTAGTGGGAGGAGGAACAGGACCTGCTGATGGAACACGTGCTACAACTTGTACACCGGCCCCAAATCAGATGAAAATGATGCTACAATCAACGGATGACATGCCTTTGAACTTTGGTTTCACTGGAAAAGGGAATTGTGCCAAACCTGATGAACTACATGACATAATCAAAGCTGGAGCTATGGGACTGAAGCTGCATGAGGATTGGGGCTCTACACCGGCTGCAATAGACTGTTGTTTGTCAGTTGCAGAACAATATGATATCCAGGTTAACATACATACTGACACCTTAAATGAATCTGGATTTGTCGAAGATACAATTGCTGCATTTAAAGGGAGAACTATTCATACTTATCACAGTGAAGGTGCAGGTGGTGGCCATGCTCCAGATATCATAAAAGTATGTGGTGTGAAGAATGTTCTTCCCTCTTCAACAAATCCCACACGCCCTTATACGGTTAATACCATAGATGAGCATCATGATATGTTGATGGTCTGCCATCATCTTGATAAGGATATTCCAGAAGATGTAGCTTTTGCAGATTCAAGAATAAGGGCTGAAACAATTGCTGCTGAAGATATTTTGCATGATATGGGGGCAATTAGCATTATATCTTCTGATTCACAGGCTATGGGTCGAATTGGAGAGGTGATATGCAGAACTTGGCAAACTGCTGATAAGATGAAGTCACAAAGAGGATCACTGCAACCTGATGAACAAAATGACAACATTCGGATCAAACGTTATATTGCAAAGTACACTATAAATCCAGCTATAGCAAATGGTTTCTCAAAATATGTTGGTTCAGTTGAGGTGGATAAGTTAGCTGATCTTGTATTATGGAAGCCATCATTTTTTGGAGCCAAACCAGAAATGGTGATCAAAGGTGGTGTGGTTGCATATGCTAACATGGGTGACCCAAATGCAAGCATTCCCACACCTGAACCGGTGATTATGAGACCTATGTTCGGGGCATTTGGCAAGGCTGGTAGTGCACACTCCATTGCTTTTGTGAACAAGGTAGCTTTCGACAATGGGGTAAAAGCTTCATATGGGCTTAACAAGAGGGTGGAAGCTGTGGAAAATGTGAGGAAGCTCACCAAGCTAGACATGAAACTGAATGATGCTCTTCCAGAAATCACTGTGGATCCCGAAACATACACAGTTACAGCAGATGGAGAGGTTCTCACCTGCACCGCAGCCAAGACTGTTCCTCTTTCTACAAATTACTTCCTCTTTTAA 2505 0.4176 MKLSPREIQKLDLHNAGYLAQKRLARGLRLNYVETVALIATQILEFVRDGEKSVAELMSIGRELLGRRQVLPSVPHLVESVQVEGTFRDGTKLVTIHDPIVRENGNLELALFGSFLPVPSLDKFAENEEDHRFPGEIIFRSESLILNHGRKAIILKVVNNGDRPIQVGSHYHFIEVNPSLAFDRKKAYGMRLNIAAGNATRFEPGECKSVVLVSIGGSKVIRGGNNFVDGPVNDSNILAAMEAVPRGHTEEEDARVGITGQDYLLTTVITREEYANKYGPTTGDKIRLGDTDLFAEIEKDFAVYGDECVFGGGKVIRDGMGQSCGHCPEHSLDTVITNAVIIDYTGIVKADIGIKNGLIFSIGKAGNPCIMNDVCHKMTIGANTEVIAGEGLILTAGAIDCHVHFICPQLVHEAVTSGITTLVGGGTGPADGTRATTCTPAPNQMKMMLQSTDDMPLNFGFTGKGNCAKPDELHDIIKAGAMGLKLHEDWGSTPAAIDCCLSVAEQYDIQVNIHTDTLNESGFVEDTIAAFKGRTIHTYHSEGAGGGHAPDIIKVCGVKNVLPSSTNPTRPYTVNTIDEHHDMLMVCHHLDKDIPEDVAFADSRIRAETIAAEDILHDMGAISIISSDSQAMGRIGEVICRTWQTADKMKSQRGSLQPDEQNDNIRIKRYIAKYTINPAIANGFSKYVGSVEVDKLADLVLWKPSFFGAKPEMVIKGGVVAYANMGDPNASIPTPEPVIMRPMFGAFGKAGSAHSIAFVNKVAFDNGVKASYGLNKRVEAVENVRKLTKLDMKLNDALPEITVDPETYTVTADGEVLTCTAAKTVPLSTNYFLF* 835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2683 834 Gene3D - 397 815 - -
Pvu1g2683 834 SUPERFAMILY Urease, beta-subunit 133 247 IPR036461 -
Pvu1g2683 834 PIRSF Urease 1 834 IPR008221 GO:0006807|GO:0009039|GO:0016151
Pvu1g2683 834 Hamap Urease subunit beta [ureB]. 132 232 IPR002019 GO:0035550|GO:0043419
Pvu1g2683 834 ProSitePatterns Urease active site. 585 601 IPR017950 GO:0009039
Pvu1g2683 834 Gene3D Urease, subunit C, domain 1 267 747 IPR011059 GO:0016810
Pvu1g2683 834 Pfam Urease alpha-subunit, N-terminal domain 269 387 IPR011612 -
Pvu1g2683 834 TIGRFAM urease_gam: urease, gamma subunit 1 101 IPR002026 GO:0016151|GO:0043419
Pvu1g2683 834 TIGRFAM urease_alph: urease, alpha subunit 269 834 IPR005848 GO:0006807|GO:0009039|GO:0016151
Pvu1g2683 834 SUPERFAMILY Metallo-dependent hydrolases 397 834 IPR032466 -
Pvu1g2683 834 Hamap Urease subunit alpha [ureC]. 267 834 IPR005848 GO:0006807|GO:0009039|GO:0016151
Pvu1g2683 834 CDD Urease_gamma 4 100 IPR002026 GO:0016151|GO:0043419
Pvu1g2683 834 CDD Urease_alpha 269 833 IPR005848 GO:0006807|GO:0009039|GO:0016151
Pvu1g2683 834 Pfam Amidohydrolase family 393 720 IPR006680 GO:0016787
Pvu1g2683 834 CDD Urease_beta 134 232 IPR002019 GO:0035550|GO:0043419
Pvu1g2683 834 SUPERFAMILY Composite domain of metallo-dependent hydrolases 676 746 IPR011059 GO:0016810
Pvu1g2683 834 PRINTS Urea amidohydrolase (urease) protein signature 563 580 IPR005848 GO:0006807|GO:0009039|GO:0016151
Pvu1g2683 834 PRINTS Urea amidohydrolase (urease) protein signature 602 618 IPR005848 GO:0006807|GO:0009039|GO:0016151
Pvu1g2683 834 PRINTS Urea amidohydrolase (urease) protein signature 668 683 IPR005848 GO:0006807|GO:0009039|GO:0016151
Pvu1g2683 834 PRINTS Urea amidohydrolase (urease) protein signature 694 707 IPR005848 GO:0006807|GO:0009039|GO:0016151
Pvu1g2683 834 PANTHER UREASE 1 834 - -
Pvu1g2683 834 Gene3D - 4 124 IPR036463 GO:0016151|GO:0043419
Pvu1g2683 834 SUPERFAMILY Composite domain of metallo-dependent hydrolases 268 445 IPR011059 GO:0016810
Pvu1g2683 834 Pfam Urease beta subunit 134 230 IPR002019 GO:0035550|GO:0043419
Pvu1g2683 834 SUPERFAMILY Urease, gamma-subunit 1 104 IPR036463 GO:0016151|GO:0043419
Pvu1g2683 834 Pfam Urease subunit beta-alpha linker domain 232 262 IPR040881 -
Pvu1g2683 834 Pfam Urease, gamma subunit 1 100 IPR002026 GO:0016151|GO:0043419
Pvu1g2683 834 TIGRFAM urease_beta: urease, beta subunit 134 233 IPR002019 GO:0035550|GO:0043419
Pvu1g2683 834 ProSiteProfiles Urease domain profile. 397 834 IPR017951 GO:0006807|GO:0009039|GO:0016151
Pvu1g2683 834 ProSitePatterns Urease nickel ligands signature. 395 408 IPR029754 GO:0016151
Pvu1g2683 834 Gene3D Urease, beta subunit 150 266 IPR036461 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2683 K01427 - gmx:547672 1481.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2683 1 51529141 51536305 Pvu1g2683 1 51529141 51536305 ECH