Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2678 ATGTGGGGATTTCTCCGAACTCGAACGTGTTTGCGATATTCTGAGTCCCTTCTTCTTCATCAGCCATGGAAGAAGAACGTAGCCTTTTCTTCTTTCGCCGCCGTGGACGGCCGTAAAGACCTTCTGGATCTGCCGGAGATCGAGAAGGTTCTGACGGAGATCAAAGCTGACGACGTTAAGGTGATACCGGTTCCCAAGCACTGCGATTGGGCTGATTTCATGGTTCTCGCCACTGGCAGGTCCACCTGGCACGTCAAGAACATCGCTCAAGCCCTAATTTACAAGGCTAAACAGAAACAGAAGGGAGCTGAACGAATGATGCTGCCGAGTGTGCAAGGGCAAGCTGGAGGAAAGTGGATCGTCATTGACTCTGGTAAAGTGATAATTCATGCACTTGATGAAAAGGCTAGAGCTTACTACAATTTGGAGGGCCTTTGGACCCCAGGGACAATTCAACACGAACCTGATGGGGATATACAAAAAGCTTTGGTGAAGGTTCGTCGGAAAAACAATTCGAAGAAACCTGCACAAAAGAATGCTTAA 543 0.4825 MWGFLRTRTCLRYSESLLLHQPWKKNVAFSSFAAVDGRKDLLDLPEIEKVLTEIKADDVKVIPVPKHCDWADFMVLATGRSTWHVKNIAQALIYKAKQKQKGAERMMLPSVQGQAGGKWIVIDSGKVIIHALDEKARAYYNLEGLWTPGTIQHEPDGDIQKALVKVRRKNNSKKPAQKNA* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2678 180 Gene3D Beta Polymerase, domain 2 43 156 IPR043519 -
Pvu1g2678 180 Pfam Ribosomal silencing factor during starvation 46 146 - -
Pvu1g2678 180 Hamap Ribosomal silencing factor RsfS [rsfS]. 38 147 IPR004394 -
Pvu1g2678 180 PANTHER MITOCHONDRIAL ASSEMBLY OF RIBOSOMAL LARGE SUBUNIT PROTEIN 1 36 171 - -
Pvu1g2678 180 SUPERFAMILY Nucleotidyltransferase 46 151 IPR043519 -
Pvu1g2678 180 PANTHER IOJAP SUPERFAMILY ORTHOLOG 36 171 IPR004394 -
Pvu1g2678 180 TIGRFAM rsfS_iojap_ybeB: ribosome silencing factor 46 146 IPR004394 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2678 - - var:108320297 325.094
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2678 1 51492682 51496171 Pvu1g2678 1 51492682 51496171 ECH