Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2675 ATGAGCCATTCCGAAGAAAACAGTGTTGATGTTGATGTTGTTGCTGCTAGACAGAAGAAAATTGATGATTGGCTTCCAGTGACTGCTTCAAGAAATGGGAAATGGTGGTATTCAACTTTTCATAATCTCACAGCCATGGTTGGTGCAGGTGTTCTCACCCTTCCCTATGCCATGTCAAATATGGGCTGGGGTCCTGGTGCTACTGTGCTGTTCTTGTCATGGATCATCACCCTCTACACCCTGTGGCAAATGGTGGAGATGCACGAAATGGTGCCTGGGAAGAGATTCGACAGGTACCATGAGTTGGGTCAGCATGCCTTTGGAGAGAAGTTGGGTCTGTGGGTTGTGGTTCCTCAACAGGTCATTGTTGAAGTTGGAACATGCATCGTGTATACAGTGACTGGGGGCAAGTCATTGAAGAAATTTCATGATACCATTTGCCCTGATTGCAAAGATATCAGAACCTCTTATTGGATTGTTATATTTGCTTCTGTCAACTTGGTTCTTGCACAATTCCCCAACTTCAACTCCATCTCTGTTATCTCTTTTGGTGCAGCTGCCATGTCTCTCATGTACTCAACCATCTCTTGGTGTGCTGCTATAAACAAGGGCACTGAACCTGATGTGAGTTATGGGCTCAAAGCCACCAATTCCACTGATGCAGTGTTCAACTTTCTCTCTGCCTTGGGAGATGTAGCATTTGCCTATGCAGGCCACAATGTGGTTTTGGAAATTCAAGCAACCATGCCTTCAACCCCAGAGATGCCTTCCAAGAAACCCATGTGGAGAGGTGTTATTTTGGCATACATTGGAGTTGCATTCTGCTACTTACCTGTTGCTTTCATTGGCTACTATATCTTTGGAAACTCAGTTGATGATAACATTCTCATCACACTACAACGCCCCTCTTGGCTCATTGCCACAGCTAACTTTTTTTGTCTTTCTCCATGTTGTTGGAGGCTACCAACTTCTTATTCTCCAACCAACTGGAGATCCAATCGATATTACAACATATCAGTCACTTTAACATATCATAGCAAGATACAAGAACACATCAATCCTTCGAAGGAATACATTCTCTGGACAAGACACAAAAGTCCAACAACTAAACTCATTCTTTGTCACCAAACAGAAGTAAACCAAACACACAAACGCCAAACCCATCAAACTCATCATGCGATGAGGATATACAAGCCAAAAAACTTGCACAAAACATACCATGTGTTTGCTATGCCAGTGTTTGATATGATCGAAACCTACATGGTTACCAAGTTGAATTTTTCACCTTCTACTGTTCTACGAGTGACAACTAGAAGCATATATGTTGCACTCACTATGCTAATTGCCATATGTATACCATTCTTTGGCTCTCTGCTTGGATTTCTTGGAGGCTTGGCCTCTGCCCCAACTTCATATTTTTTGCCCTGTATCATATGGCTCAGGCTCATGAGGCCCAAGAGATATGGCTTGTCTTGGACAATCAACTGGATCTGCATTTTTCTTGGGGTATTGTTGATGATACTATCTCCTATTGCTGCTATGAGAAATATCATCATGTCAGCCAAAGACTACAAGTTCTTCTCATAA 1587 0.4266 MSHSEENSVDVDVVAARQKKIDDWLPVTASRNGKWWYSTFHNLTAMVGAGVLTLPYAMSNMGWGPGATVLFLSWIITLYTLWQMVEMHEMVPGKRFDRYHELGQHAFGEKLGLWVVVPQQVIVEVGTCIVYTVTGGKSLKKFHDTICPDCKDIRTSYWIVIFASVNLVLAQFPNFNSISVISFGAAAMSLMYSTISWCAAINKGTEPDVSYGLKATNSTDAVFNFLSALGDVAFAYAGHNVVLEIQATMPSTPEMPSKKPMWRGVILAYIGVAFCYLPVAFIGYYIFGNSVDDNILITLQRPSWLIATANFFCLSPCCWRLPTSYSPTNWRSNRYYNISVTLTYHSKIQEHINPSKEYILWTRHKSPTTKLILCHQTEVNQTHKRQTHQTHHAMRIYKPKNLHKTYHVFAMPVFDMIETYMVTKLNFSPSTVLRVTTRSIYVALTMLIAICIPFFGSLLGFLGGLASAPTSYFLPCIIWLRLMRPKRYGLSWTINWICIFLGVLLMILSPIAAMRNIIMSAKDYKFFS* 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2675 528 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 12 314 - -
Pvu1g2675 528 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 405 523 - -
Pvu1g2675 528 Pfam Transmembrane amino acid transporter protein 32 315 IPR013057 -
Pvu1g2675 528 Pfam Transmembrane amino acid transporter protein 405 513 IPR013057 -
Pvu1g2675 528 PANTHER OS05G0424000 PROTEIN-RELATED 405 523 - -
Pvu1g2675 528 PANTHER OS05G0424000 PROTEIN-RELATED 12 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2675 Pvu-Chr1 51474307 51478917 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g2675 405 528 Organic Solute Cotransporters AT1G24400 66.129 1.67e-42 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2675 - - pvu:PHAVU_001G259200g 1073.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2675 1 51474307 51478917 Pvu1g2675 1 51474307 51478917 ECH
Pvu1g2675 1 51474307 51478917 Pvu2g1816 2 32724650 32726691 PCT