Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2668 ATGACGGAAAGTGAAGGAAAGCGTGAGAAAATGCTCAAAGAGAAGAACGGTGGAAGCCTCCTCGTATTCACCGGAGGTGCGGCGGTGCTCGCGATTGCGGCGAATCTCGCCATCGCCGCATTAAGGCACCGCAGGGAAAAAAATGCAAAGAAGAAAGATCTTGCAGGTTCTAAGGTGCGTGTTAACCTATCTGCGCCTGAGATTCTTAAATTAGCTGAACAAATCATTGCCAACTCGAAGAAGGTCCATAATTCTGTTGCGACGGTGCCTCTCGACAAGGTTACATATGCAAATGTTATAGCACCTCTGGCAGAACTGCAAGCGCAGCAATTTCCACTGGTTCAGTCTTGTGTGTTTCCGAAGATGGTATCTACTCGGGAGGATGTACGCAAAGCAAGTGCAGAAGCAGAACGAAGAATAGATGATCATTTTGATGCGTGCAGCAAACGTGAAGATGTGTATCTTGTCATTAAAGCATTTGCAGTAAGGGGCGAGAGGGTAAATGCTGAAGCCAAACGCTTTGTTCAAACTCTGGTGAGAGACTTTGAGCGAAATGGATTGAACCTCACTGCAAGTAAAAGAGAAGAATTGCAGCGTATAAAAGCTCAGATTGATGAATTAAGCATAAAATATATCCAAAATCTCAATGACGAGACCAAGTTCTTTCTCTTCGATGAGTCAGAGTTAGCTGGATTACCTTCGGAGTTTCTCAAGGATTTAGACAAATCGGAAAATGGAAAATTTAAAATCTCCCTGAGAAGTCATCATGTTGCAGCTGTACTTCAATTTTGCAAGGTTGGAACTACAAGGCAGATGGTATCAGGGGCATATGGGAATCGGTGTGGGGAAACCAACATTTCTATCTTAGAAAGCCTGGTGCAACAACGTCATAAATATGCTCGTTTACTTGGTTTTTCGTGCTATGCAGAGTATGCCATTGATGTTAGAATGGCGAAGACTCCAAAAAAGGTGTTTGAGTTCCTGAAAGACATATCGGCAAGTTTAACTGATTTGGCCACGAAAGAACTTAATATCTTGAAAGATTTGAAGAAGAAAGAGGAAGGGGAGTTTCCATTTGGAATTGAGGACCTACTATATTATGTAAAACGGGTTGAAGAACAGAGCTACGATTTGGATTTTGGAGAAATCAAACAATACTTTCCAATTACTGTGGTTCTATCGGGGATCTTCAAAATTGTCCAAGATCTATTTGGCTTAAAATTTGAGGAAATTTCAGGAGCAGATGTTTGGCATTGTGATGTTCGTGTTTTTACCGTGCTGGACTTGGGTTCTAGTGAACTCTTAGGTTATTGCTACCTTGATTTGTTCTCAAGGGAAGGAAAATATGGTCATTCTTGTGTGTTGGCTCTCCAGAACAGTGCATTAACAATCAGTGGGGCAAACCAGATACCGGTTGCATTGCTAATATCTCAGTGTCAAAAGGAAGCTGATGGTAGTTCTGGATTATTGCGGTTTTCTGAAGTGGTCAGTCTTTTCCATGAGTTTGGCCACATGGTTCAACAAATTTGCAACCGTGCATCGTATACCAGAATTTCTGGATTATGTGTTGATCCAGACTTTGTGGAAATTCCTTCTCAACTATTAGAAAACTGGTGTTATGAAAGCTATTCTCTCAAGTTGATTTCGGGATTTCATCAGGATATTACAAAGCCGTTGAAGGATGACATATGCAATTCAATTAAAAGATGGAGGACTTCTTTTTCTGCACTTAAATTGAAGCAAGATATTCTATGCTGTCTTTTTGACCAAATCATACATTCCGCGGATAACATAGACGTTCAGGAATTATTCAAGCATCTTCATCCCATGGAGATGTTAGGCTTGCCTATACCGGAAGGAACCAATCCAGCGTCATATTTTCCTTCGGCTGTCATAGGTTATGAGGCAGCTTGCTATAGTCGTATATGGAGTGAGGTTTTTGCTGCTGATATATTCACCTCAAAGTTCTGCAACGATGTTTCAAACCAGCATGCCGGCATGCAATTCAGGAACAAGGTTTTGGCCACTGCCGGAATGAAAGATCCTAATGATGTGTTATCAGACTTTCTAGGAAGAGAACCATCAATCCAAGCTTACATTGAGAACAAAGTCAAGTATGTTTTGTAA 2127 0.4133 MTESEGKREKMLKEKNGGSLLVFTGGAAVLAIAANLAIAALRHRREKNAKKKDLAGSKVRVNLSAPEILKLAEQIIANSKKVHNSVATVPLDKVTYANVIAPLAELQAQQFPLVQSCVFPKMVSTREDVRKASAEAERRIDDHFDACSKREDVYLVIKAFAVRGERVNAEAKRFVQTLVRDFERNGLNLTASKREELQRIKAQIDELSIKYIQNLNDETKFFLFDESELAGLPSEFLKDLDKSENGKFKISLRSHHVAAVLQFCKVGTTRQMVSGAYGNRCGETNISILESLVQQRHKYARLLGFSCYAEYAIDVRMAKTPKKVFEFLKDISASLTDLATKELNILKDLKKKEEGEFPFGIEDLLYYVKRVEEQSYDLDFGEIKQYFPITVVLSGIFKIVQDLFGLKFEEISGADVWHCDVRVFTVLDLGSSELLGYCYLDLFSREGKYGHSCVLALQNSALTISGANQIPVALLISQCQKEADGSSGLLRFSEVVSLFHEFGHMVQQICNRASYTRISGLCVDPDFVEIPSQLLENWCYESYSLKLISGFHQDITKPLKDDICNSIKRWRTSFSALKLKQDILCCLFDQIIHSADNIDVQELFKHLHPMEMLGLPIPEGTNPASYFPSAVIGYEAACYSRIWSEVFAADIFTSKFCNDVSNQHAGMQFRNKVLATAGMKDPNDVLSDFLGREPSIQAYIENKVKYVL* 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2668 708 Gene3D Collagenase (Catalytic Domain) 388 538 IPR024079 GO:0008237
Pvu1g2668 708 Coils Coil 190 210 - -
Pvu1g2668 708 Pfam Peptidase family M3 263 701 IPR001567 GO:0004222|GO:0006508
Pvu1g2668 708 Gene3D Endopeptidase. Chain P; domain 1 39 184 IPR024080 -
Pvu1g2668 708 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 63 701 - -
Pvu1g2668 708 CDD M3A_TOP 69 701 - -
Pvu1g2668 708 Gene3D Neurolysin, domain 3 194 700 IPR024077 -
Pvu1g2668 708 PANTHER SACCHAROLYSIN 47 705 - -
Pvu1g2668 708 PANTHER PROTEASE M3 THIMET OLIGOPEPTIDASE-RELATED 47 705 IPR045090 GO:0004222|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2668 Pvu-Chr1 51425356 51435643 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2668 K01392 - gmx:100793518 1244.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2668 1 51425356 51435643 Pvu1g2668 1 51425356 51435643 ECH