Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2661 ATGGCAATGATTCCGTACCAACTTTACCGTTTGCCTTACCACGATTCCCTCAAAGTACTTGAGGCTGATATACAGCACGCCAATGCTTTGGCTGCTGCAATTCCCAGAGCCAAGGGTGGGACTATTCTCCAAATGAAATTGGTTTACAATCAGTTGGCTCCTCTCGTCCTGTTATTTCTACAATGGATGGATTGTTCTTGCGCAGGCTTTCTCCATAAGTATCTCAACCTCTTCCATGTGATTATATACAAGGTACACAATGATGGTAGATCAAACATGTCTACACATGGAAGGAAGGCTACCATTGGGGACTTTTATGCTGTTATATTGCCATCTCTCCAACGACTTCATGGTAGTTTGGAGAAGCTGGAGGCTGTTGAAGAAGGACAAACAAGCATAGAAGGTTCAAGCTATGGCAACAAGTTGATTGAAGCAAGTGGGAGACTCACCAATATTGATTTGCAAAGAGAAGATGAATGTGGAATTTGCTTAGAGCCTTGCACCAAAATGGTTTTACCTGGTTGCTGCCATGCCATGTGTATCAAATGCTACCGCAAGTGGAACAGAAAGTCAGAGTCTTGTCCTTTTTGTCGTGGGAGCTTGAGGAGAGTTAATTCAGAGGATCTTTGGGTACTAACTTGTGATGATGATGTTGTTGATGCTGAAACAGTTTCTAAAGAGGACTTGTTGCGTTTTTACCTCTATATCAGCAAGCTGCCAAAAGATCACCCAGAAGCACTTTTCCTAATGTATTATGAATACCTCATCTAA 771 0.4228 MAMIPYQLYRLPYHDSLKVLEADIQHANALAAAIPRAKGGTILQMKLVYNQLAPLVLLFLQWMDCSCAGFLHKYLNLFHVIIYKVHNDGRSNMSTHGRKATIGDFYAVILPSLQRLHGSLEKLEAVEEGQTSIEGSSYGNKLIEASGRLTNIDLQREDECGICLEPCTKMVLPGCCHAMCIKCYRKWNRKSESCPFCRGSLRRVNSEDLWVLTCDDDVVDAETVSKEDLLRFYLYISKLPKDHPEALFLMYYEYLI* 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2661 256 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 139 209 IPR013083 -
Pvu1g2661 256 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 6 256 - -
Pvu1g2661 256 SMART ring_2 160 197 IPR001841 -
Pvu1g2661 256 Pfam Ring finger domain 158 198 IPR001841 -
Pvu1g2661 256 ProSitePatterns Zinc finger RING-type signature. 175 184 IPR017907 -
Pvu1g2661 256 PANTHER RING FINGER PROTEIN 41, 151 6 256 - -
Pvu1g2661 256 ProSiteProfiles Zinc finger RING-type profile. 160 198 IPR001841 -
Pvu1g2661 256 SUPERFAMILY RING/U-box 151 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2661 Pvu-Chr1 51374629 51376661 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2661 - - gmx:100812518 482.641
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2661 1 51374629 51376661 Pvu1g2661 1 51374629 51376661 ECH
Pvu1g2661 1 51374629 51376661 Pvu2g1825 2 32870422 32872511 PCT