Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2649 ATGAATCCTCTGTGCTGCATTGCGCCGGTTTCGATCGATCGGGAGCGGGCGAACTCTGTGGTGGCGAAATCGCCGAGTCAGTGTCAGCTAGGGCTCGATGCGGCCGTCAGGACGGTGAACTATGCTTCTAAATCGAGCTTCTCCGCGCTGGATTCATCCGTTGGCGCGGATTCCGTCAAGGCATCCGCTGCTGCTGCGGATCTCGAGGAGGAGGAGGAGCCGCGCGATTCGAAGGCTTACGGCGTGGCCGGGAGTGTCGCCGGGATCCTGTACAAGTGGGTGAATTACGGGAAGGGGTGGAGATCGAGGTGGTTCGTGCTGGAAGATGGCGTGCTTTCGTATTACAAGATTCACGGACCGGACAAGATCTTGATGAGTCCGGCCAGGGATTGGAGCGTGAGGGTAATCGGAGAAGAGTCGTCGAAGTACGTGAAGAAGGCGAATTGGAATCTGAATCGAGCACCTTCTGGAGGAGCAGGGGGAGGGAATAGTAACAACGGGAAGCAATGCAAACCGTTCGGTGAGATACATTTGAAGGTTTCTTCAGTTCGTTCCAGCAAGTCTGATGATAAGCGGCTTTCCATATTTACTGGGACAAAAACTCTCCACTTGCGGTGTGTATGTAGAGAAGACAGAGCCATGTGGATTGAGGCCTTGCAGTCTGCAAAAGATCTTTTTCCCAGAACTCTAACAAGTAGTGATCTTGCAACATCAGAAGATATTGTGGTTTCCACAGAGAAGTTGCGATCACGATTGTCACAGGAAGGCATAAGTGAAGCAACCATTAATGACTGCGAGTCTATTATGCTTTCCGAAGTATCTTATCTCCAAAGCAAGTTGAAGTATCTTCAGCAGAAACATGTTATGCTGCTGGACACCTTAAAACAATTGGAGACAGAGAAAATAGAGTTGGAAACTACTGTAGTTGATGAAACAAAGGAACGGGAATCATATTGTGGGCAAGGAAATAGAAGGTTTAGTGATTTTTATTCTGTCATGTCGGAGGGTAGTGCTACTGACTCAGTGGCGGATAATGAAAGTCAAGATGGAGCAGATGTTGAAACAGATGATGATGATAGAACATATTTTGACACAAACGAGTTTTTGTACTCTGATGCCCTGAGGAGTGCATCCTATCGAAGTAGGGAAGGTATGACCAATGGGAGTATATATGATAGAGATTATATTTGTTATGATGGCGTGCATGGGTTTGACAAGGAGATCAAAGATGTTAGGTATCCATATGTCAAAAGAAGGGATAACTTACCAGAGCCAAAAGAAAAAGAGAAGCCTGTTGGCCTGTGGTCAATTATTAAAGACAATATTGGGAAGGATCTTTCAGGAGTTTGTCTCCCTGTTTATTTTAATGAACCACTGTCTTCATTGCAAAAGTGTTTTGAAGACCTAGAGTACTCATACCTGGTTGATAGAGCATTGGAATGGGGAAAGCAGGGGAATGATTTGATGAGAATTCTAAATATTGCAGCTTTTGCTGTATCCAGCTATGCATCAACTGAAGGTAGACAATGTAAACCTTTTAATCCTTTACTTGGGGAGACTTACGAAGCTGACTATCCAGATAAAGGACTTAAGTTTTTTTCTGAAAAGGTTAGTCATCATCCAATGATTGTTGCCTGTCATTGTGAGGGAAGGGGGTGGAAGTTTTGGGCAGATTCTAATTTGAAAGGAAAATTCTGGGGGCGTTCTATCCAGTTAGATCCTGTGGGAGTCCTAACTCTACAATTTGAGAATGGTGAAACATTTCAGTGGAGCAAGGTCACCACTTCCATATACAATATCATATTAGGTAAAATTTATTGTGACCACTACGGTACCATGCACATCAGGGGCAGCGGCAACTATTCTTGCAAACTGAAATTCAAGGAGCAATCTATTATAGACCGAAATCCACATCAGGTCCATGGATTTGTTCAAGACAACAGAACCGGAGAGAAGGTAGCAATGTTAATTGGGAAGTGGGATGAAGCAATGTACTATGTACTTGGAGATCCAACCACCAAGCCAAAAGGTTATGATCCGATGACAGAAGCTGCGATATTGTGGGAAAGGGACAGCTCTGTATCCAAGACAAGATACAACCTCTCTCCTTTTGCAATTTCCTTGAATGAAATATTACCTGGTTTAGTAGACAAGTTGCCTCCCACTGACTCAAGGTTGAGACCAGATCAAAGACATTTAGAAAATGGAGAATATGAGCTGGCAAATGCAGAGAAACTAAGACTTGAACAGTTGCAGAGACAGGCAAGAAAGATGCAAGAAAGAGGATGGCAGCCAAGATGGTTTAAGAAGGATGATGATGGTTGCTACCGATATATTGGTGGGTATTGGGAAACAAGAGAAAAGAACAATTGGAATGGAATCCCTGATGTATTTGGACAGAGTTGCGATTTACCTTCATGTTCCGAAGAGACTCTATCCTACTGA 2445 0.4417 MNPLCCIAPVSIDRERANSVVAKSPSQCQLGLDAAVRTVNYASKSSFSALDSSVGADSVKASAAAADLEEEEEPRDSKAYGVAGSVAGILYKWVNYGKGWRSRWFVLEDGVLSYYKIHGPDKILMSPARDWSVRVIGEESSKYVKKANWNLNRAPSGGAGGGNSNNGKQCKPFGEIHLKVSSVRSSKSDDKRLSIFTGTKTLHLRCVCREDRAMWIEALQSAKDLFPRTLTSSDLATSEDIVVSTEKLRSRLSQEGISEATINDCESIMLSEVSYLQSKLKYLQQKHVMLLDTLKQLETEKIELETTVVDETKERESYCGQGNRRFSDFYSVMSEGSATDSVADNESQDGADVETDDDDRTYFDTNEFLYSDALRSASYRSREGMTNGSIYDRDYICYDGVHGFDKEIKDVRYPYVKRRDNLPEPKEKEKPVGLWSIIKDNIGKDLSGVCLPVYFNEPLSSLQKCFEDLEYSYLVDRALEWGKQGNDLMRILNIAAFAVSSYASTEGRQCKPFNPLLGETYEADYPDKGLKFFSEKVSHHPMIVACHCEGRGWKFWADSNLKGKFWGRSIQLDPVGVLTLQFENGETFQWSKVTTSIYNIILGKIYCDHYGTMHIRGSGNYSCKLKFKEQSIIDRNPHQVHGFVQDNRTGEKVAMLIGKWDEAMYYVLGDPTTKPKGYDPMTEAAILWERDSSVSKTRYNLSPFAISLNEILPGLVDKLPPTDSRLRPDQRHLENGEYELANAEKLRLEQLQRQARKMQERGWQPRWFKKDDDGCYRYIGGYWETREKNNWNGIPDVFGQSCDLPSCSEETLSY* 815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2649 814 Coils Coil 741 761 - -
Pvu1g2649 814 Pfam Pleckstrin homology domain 88 221 - -
Pvu1g2649 814 Gene3D - 730 796 - -
Pvu1g2649 814 Gene3D - 519 686 - -
Pvu1g2649 814 SMART PH_update 84 226 IPR001849 -
Pvu1g2649 814 Coils Coil 280 314 - -
Pvu1g2649 814 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED PROTEIN 1D 2 803 - -
Pvu1g2649 814 MobiDBLite consensus disorder prediction 337 357 - -
Pvu1g2649 814 ProSiteProfiles PH domain profile. 83 224 IPR001849 -
Pvu1g2649 814 Gene3D - 83 226 IPR011993 -
Pvu1g2649 814 SUPERFAMILY PH domain-like 86 224 - -
Pvu1g2649 814 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 2 803 IPR000648 GO:0008289
Pvu1g2649 814 SUPERFAMILY Oxysterol-binding protein-like 428 800 IPR037239 -
Pvu1g2649 814 Pfam Oxysterol-binding protein 434 787 IPR000648 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2649 Pvu-Chr1 51291942 51299126 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2649 K20456 - gmx:100788779 1524.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2649 1 51291942 51299126 Pvu1g2649 1 51291942 51299126 ECH