Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2648 ATGGGTCCCGACGGCATGGTGGCGGCGGCGGAAGCGCTGGCTCCTTCCGGTAGGAGCGCGGAGAAGCTGAGTCTCTCGTCACTCCAATCGAAAATGAAGTGCGATCCCGAAGGCTACGAATCGGAGCTACTTCTGATTTATAACCAATTCAATTCCTCCCTCGAACTCTTTCAGAAACAAGCCGCAATGAACTTCACCTCCGTCACCGGCATCGGCAGCGATCCCACCGTCGCCAAGGACCTCGGCGACAGGGCCATGTTCCTCTCCCACGTCACTCCTTTTTACCCCAAATACCTCGTCGATTTTCCTCGCAAACTCGCCGATTTGCTTCGCTGCGCAGCGCGCACGTTGCCTTCTGGACTTCGTTGCCAACTCACTCACGCGCTCATCCTCATCGCTAATAGAAAGATTGTTGATGTTGGAGAAACGCTGTCGTTGTTCATGGAACTTCAAACCTTGGGTGACAGGACGCTGAAGAAGCTTGCCTTTGATCATGTTGTTCATAGTATAAGGCGCATGAACCAAAAGCATAAGAACGAAGCCAAGAACCGCGCGCTTCAGAATATCTTGTTTGGATTGGTTCAGAAAGAGGAGGAAGAGCTGGCCAAGAGGGCACTTGTGACCCTATGTGAGCTACATAGGAGAAAAGTGTGGTTTGATGAAAGAACAGCAAATGCAATTTGCACAGCTTCCTTCCATCCATCATCGAGGATTATGATAGCAGCTTTATCATTTCTGCTTGATTACGAGAAGATTCAAGATGATGATGATAGTGATGATTCAGGCAGTGACGATGAAGCAAAAGAATCTCCTCAAGTTGCTCTCAGCAGACAGACCCTTTATAAGGCAAGCCACCAAGGTACAGCAGCGAGCAAGAAGAAAAAGCAAGCAAAACTACAACGCGCCATGCGCAGCATGAAAAGGCAGCAGCGCATGTCGTCTGAAAGGACCAATAACAGTTATTATTCACCACTCAACCATCTTAAAGATGCCCAGGGTTTTGCCGAGAAGCTGTTCTCACGTCTAAAGAATTGTAATGAACGTTTTGAGGTTAAGATGATGATCTTGAAATTGATTGCTCGAACAGTTGGACTTCACCGATTATTTTTGCTAGACTTCTATCCTTTTCTTCAGAAATATATTCAGCCACATCAACGTGACATTACAAATTTGCTTGCAGCAGTTGTTCAGGCTTGCCATGACATGGTCCCTCCTGATGCAGTTGAGCCCTTGTTCAAGCAAATAGTAAATCAATTTGTACATGATCGTTCACGTCCAGAGGCTATTACTGTTGGAATAAATGCAGTGAGGGAGATATGCATGCGCATGCCATTGTTAATGAATGAAGACTTGTTACAAGACCTTGCACTATATAAGAAGTCACGTGAGAAGGCAGTTTCAGTGGCAGCTCGATCTCTTATTGGGTTATTCAGAGAGGTTTGCCCCTCACTGCTAATTAAGAAGGACCGTGGACGGCCTCTTGACCTGAAGGCAAGACCAAAGGCATATGGAGAAGTCACTGTTGCGACTGATGTTTCTGGTGTTGAGTTATTGCAGGCTGTTGACAATGATGATCAGGATAGTGATCATTCTGATGATTCTGCATGTAGTGTCTCGGACAATGACCAGCAAAATGATCTGATGAGTATTAATGATGATGATGATAATGAGAGCCAGCTATTTGGTGATGATGCCGAAAGTGATGATGATGATGATGAAGCGGAAGGTAGTGATGTTGTATCAGAAGATGAAGATGAGAGTTCTGGTTTTGAAGCTGGTGATAGTGATACTGATGAAGATGTTGAGGTTAAGGGGGATGGCAATGATGAAGAGGATGATGATGTTTCAGATCATGAAGAAGATGGTGATCAGGATTATTTAAGTGGTGACGGCAATGTGGAGACAAGAAGTAAATTGAAAGACTCAGCCAAAAAGAGGAAGTTTACTGATTTTGATGGTGGAATTATTGCTGCTGATACAAGTCTTCGCGCTTTGAAGAAATTGGCAGGGGCTAAAGTGGGGGATGTCCTACCAGAATCTCAAGATGGAATTCTTTCTAATGAAGACTTCCAGAGAATCAAAGAATTAAAGGCAAAAAGAGAAGCAAAAAATGCATTGGCTCAGCAAGGACTAGCGAAGTCATCAGGAATTAAAGTTCCAAGCTCTGATCAACTAAGTCTAAAGCGAGTGGATGGTGCAATGCTGGAAGTTCATGTAAAGAAAAAGATGAACAAAGAGGAAAGGTTGGCATTGGTTAGAGCAGGGAGGGAGGAAAGAGGAAAGTATCATGCTCGAACTGCTGTAAAACAGAATAAGACGGGTGGTCTAAGCAACCGACAAAAGGAGCACAAGAAGAAAATGCCCTTGGCTGCAAAGAGAGATAAGGTATCAAGAACCCGGATAGAGAAAAAGAGAAAAAACCAGCGATCTGGCAAACAGTTCCGTGGAAGGAAAGCGTGGAAGCAATAG 2469 0.448 MGPDGMVAAAEALAPSGRSAEKLSLSSLQSKMKCDPEGYESELLLIYNQFNSSLELFQKQAAMNFTSVTGIGSDPTVAKDLGDRAMFLSHVTPFYPKYLVDFPRKLADLLRCAARTLPSGLRCQLTHALILIANRKIVDVGETLSLFMELQTLGDRTLKKLAFDHVVHSIRRMNQKHKNEAKNRALQNILFGLVQKEEEELAKRALVTLCELHRRKVWFDERTANAICTASFHPSSRIMIAALSFLLDYEKIQDDDDSDDSGSDDEAKESPQVALSRQTLYKASHQGTAASKKKKQAKLQRAMRSMKRQQRMSSERTNNSYYSPLNHLKDAQGFAEKLFSRLKNCNERFEVKMMILKLIARTVGLHRLFLLDFYPFLQKYIQPHQRDITNLLAAVVQACHDMVPPDAVEPLFKQIVNQFVHDRSRPEAITVGINAVREICMRMPLLMNEDLLQDLALYKKSREKAVSVAARSLIGLFREVCPSLLIKKDRGRPLDLKARPKAYGEVTVATDVSGVELLQAVDNDDQDSDHSDDSACSVSDNDQQNDLMSINDDDDNESQLFGDDAESDDDDDEAEGSDVVSEDEDESSGFEAGDSDTDEDVEVKGDGNDEEDDDVSDHEEDGDQDYLSGDGNVETRSKLKDSAKKRKFTDFDGGIIAADTSLRALKKLAGAKVGDVLPESQDGILSNEDFQRIKELKAKREAKNALAQQGLAKSSGIKVPSSDQLSLKRVDGAMLEVHVKKKMNKEERLALVRAGREERGKYHARTAVKQNKTGGLSNRQKEHKKKMPLAAKRDKVSRTRIEKKRKNQRSGKQFRGRKAWKQ* 823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2648 822 PANTHER PROTEIN SDA1 HOMOLOG 21 821 - -
Pvu1g2648 822 SUPERFAMILY ARM repeat 86 488 IPR016024 -
Pvu1g2648 822 MobiDBLite consensus disorder prediction 547 627 - -
Pvu1g2648 822 MobiDBLite consensus disorder prediction 776 797 - -
Pvu1g2648 822 Pfam SDA1 447 818 IPR007949 -
Pvu1g2648 822 MobiDBLite consensus disorder prediction 301 322 - -
Pvu1g2648 822 MobiDBLite consensus disorder prediction 756 822 - -
Pvu1g2648 822 PANTHER HSDA/SDA1-RELATED 21 821 IPR027312 GO:0000055|GO:0042273
Pvu1g2648 822 MobiDBLite consensus disorder prediction 254 274 - -
Pvu1g2648 822 MobiDBLite consensus disorder prediction 523 642 - -
Pvu1g2648 822 Pfam NUC130/3NT domain 87 138 IPR012977 -
Pvu1g2648 822 MobiDBLite consensus disorder prediction 798 822 - -
Pvu1g2648 822 Coils Coil 289 312 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2648 K14856 - gmx:100816774 1256.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2648 1 51286201 51290973 Pvu1g2648 1 51286201 51290973 ECH