Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2644 ATGATAGAAGAACCTCGTAAATTTTCTATTGTGGTGGTGCATTTCAACCTTGAGTTCCTTTTTCCTTTCTCAGTTTCAAACATGCATCGTGAAAATCTTATAAAGAAGCTTCTCCTCACGCATGATTCAGATGGTCGTAGGTTGGATTCTGAGGCAATTCTTCTTGCTGTGGGCAACATTATGTTTCATTCTTCCAAAATAATAGTGACTTCTGATTTATATTCTGCTTCCTTTCAGAAGAAGGATATAACTGAAATTGAAACCATTGGTTGTAGTGAATCAGTAGGATTCATCGTCACAAAAATATGCAAGATGCTCTGCAGATGCTCTGTTGAAGGTGATATTAACTCAAGGGTCATAAATTTGTTTGATGTGATAGGGAAGTATAGCTGGGATGCAAAAGTAGTTCTAGTGCTTGCTGCTTTTGCTGTGAGATATGGTGAATTTTGGCAACTTATGCAGCTATATCGTGGTAACAATTTGGCAGCTTTAGTTTCAAGTATTAAGCAACTTCCCTGCAACTTAAAGCCACTGAAGCTACAAATCAAGGCATTGACCTTGTTGGTTGAGACCATGATGGATGTGGCTATGTGTATAATTAAGTTTGAATACTTGCCTCTTCAACACGTGGAGCATGGAAATCATATGTTCCAGGTCACAAAGTCTCAGATATACGAAGCTGCATACTGGATCGCCAGAAGCTGTTTAGCATGTTTTTCTCAACTCAAGAACTTCACAACCAAGCAACATGAGCAAGTGTACTCAGATTCAGCAATAATTGCTGCTTGGGAGCTTTCAAGTTTGGCTTATAGATTAAGTGGCACATGCTGCAATCTCAGAAGACAGGTGGATCTGTGTCGGGAAGAAATAGAGAGAAACTTGTATCAGAGGCTGTTGGATCTTGCTCGTGAGGAGCACATTGATAATCAGAAGATTCTCACTTTATTTTTTCCTTCCAAGAATTACTTGCCACTGAAAGATTGCTCAACAGAAGTAAAGTTTGGTGTGTCTGAGCTGAAAAATAAGGTAGTTCTGTTGTTGATCACAAAACCACAGCTACTGAACCCAGTGGATATATTCTTACTTGTCCAGCAAACATGTGATCATCCTCTGAATGAGAGGCTGAAGAAGAGTTATAAGATTGTGTGGCTTCCCCTTCCATCCTCTGATTCATGGACTGAAGCTGAAGAAAGTAGTTTCAATTTTCTGTCAGATTCCTTGCCTTGGCATGCTGTCCGGAAACCAATGTTACTCAGCTCAGCAGTGGGCAAGTACATAAGGAAACAATGGAACTACAAGGATGAACCCATCATGGTGGCTCTAGATTCAAAAGGGAAGGTCACAAATTACAATGCTCTTGATATGATCAACATTTGGGGATCCAAAGCTTATCCCTTTTCAGCTTCCAAAGAGGAAGAGCTGTGGCAAGACCAGAATTTGACAATGCAACTTTTGCTAGATGAGATCAACCCTCTCCTTGCTTATTGGGTTGAGCAAGGCAAAAATATCTGCCTTTATGGGAGTGAAAACTTGGTTTGGATCCAACAATTCAATGATAAGATATCTGAGCTCAAACGAGCAGGTCTGCAGCTGGAAACAATATATGTGGGTAATAGTCAATTAGGTGAATATGTTAAGCAAATAATGACAAGAAGTGGTGAAACGAGTCTCAGTGATCCACTTTCCTTCACAAACGTGCAATTCTTTTGGCTGAGGTTGGCGAGTATGAGAAGGTCTAAACTCAGACTAGGGAAGACACCAAGTTGTGATCATGTACTAGCAGAGTTGTCAGCTTTGCTTAAAATGGATGATAGGGAGGAAGGTTGGGCAGTGATTGGAAGTGGGGGTTCAACTGATATTATTAGGCTTCAAGGGATGCAGGTGATGGAATTCTCAAGGAAATGTTCTGAGTGGGGGGAAGAAGATATAACCAAGTTTGGATTGTGGGGTGCTCCAAGAAACATCCTAGAAACTGATTTTGTTGCAGGAAGTTGCACTCACTCTTACTTTGTTCCCTCAAGAGAAAATGAAGAACTGAGTCAAGGAACTGTATTTTGTCAAGTGTGCAAGCGTCCCATGAAGAAGTTTGTGGTGTACCAGCCATGA 2106 0.4074 MIEEPRKFSIVVVHFNLEFLFPFSVSNMHRENLIKKLLLTHDSDGRRLDSEAILLAVGNIMFHSSKIIVTSDLYSASFQKKDITEIETIGCSESVGFIVTKICKMLCRCSVEGDINSRVINLFDVIGKYSWDAKVVLVLAAFAVRYGEFWQLMQLYRGNNLAALVSSIKQLPCNLKPLKLQIKALTLLVETMMDVAMCIIKFEYLPLQHVEHGNHMFQVTKSQIYEAAYWIARSCLACFSQLKNFTTKQHEQVYSDSAIIAAWELSSLAYRLSGTCCNLRRQVDLCREEIERNLYQRLLDLAREEHIDNQKILTLFFPSKNYLPLKDCSTEVKFGVSELKNKVVLLLITKPQLLNPVDIFLLVQQTCDHPLNERLKKSYKIVWLPLPSSDSWTEAEESSFNFLSDSLPWHAVRKPMLLSSAVGKYIRKQWNYKDEPIMVALDSKGKVTNYNALDMINIWGSKAYPFSASKEEELWQDQNLTMQLLLDEINPLLAYWVEQGKNICLYGSENLVWIQQFNDKISELKRAGLQLETIYVGNSQLGEYVKQIMTRSGETSLSDPLSFTNVQFFWLRLASMRRSKLRLGKTPSCDHVLAELSALLKMDDREEGWAVIGSGGSTDIIRLQGMQVMEFSRKCSEWGEEDITKFGLWGAPRNILETDFVAGSCTHSYFVPSRENEELSQGTVFCQVCKRPMKKFVVYQP* 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2644 701 PANTHER PROTEIN SIEVE ELEMENT OCCLUSION C 26 700 - -
Pvu1g2644 701 PANTHER PROTEIN SIEVE ELEMENT OCCLUSION B-LIKE 26 700 IPR039299 GO:0010088
Pvu1g2644 701 Pfam Sieve element occlusion N-terminus 31 306 IPR027942 -
Pvu1g2644 701 Pfam Sieve element occlusion C-terminus 469 700 IPR027944 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2644 Pvu-Chr1 51258155 51261934 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2644 - - pvu:PHAVU_001G256100g 1405.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g2658 2 42458715 42462356 Pvu1g2644 1 51258155 51261934 PCT