Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2639 ATGGCGGAGCTCCGCCACTCCTCTTCGCTCGGCAGCCGAGCCTCCAATTCTCCGATGAAGCGTGACGCCGTCGCCGTTGGCGGCGCCGGCGATTCATCCCCTCTCATTCCGGACAGCCACCTAGCCGACGACGACGAGCACGATCGCCACTCGTCCAAGGAGCGCGACCGGCATGTCTGCTCCTTCTTAAACGACGACCCTAGGGTTTCGCCTCACCACTCCAGGATCTCACTGTTTTTCACCTTCCTTCTTCTCCTCGTTGGCTTAGTATCCGTATTCACAATCTTCCATAAACTCAATGCCCCTTACTTGTGTAAAAAGGACGGCATTGTTCTTCATTGCCCACACGTTAAGGAATCGCCATCTCTTTGGGAAAATCCTTTCTCATCCACAACATCTTGGAGGCCCTGTGCTGAGCGCCGGGATGGTGTTTTATCAGAGCTTCCTCATGAAAATGAAACAAATGGCTATATATTCATCCATGCTGAGGGTGGTCTAAATCAGCAAAGAATTGCGATATGCAATGCAGTGGCTGTAGCCAAAATAATGAATGCCACTCTTATTTTGCCGGTTTTGAAGCAGGATCAGATTTGGAAAGACCAAACGAAATTTGAAGACATTTTTGATGTGGATCACTTCATTGACTACCTTAAGTATGACGTTCGTATTGTACGTGATATCCCAACATGGTTTACTGATAAATCAGAGCTATTTTCTAGCATAAGACGGACTGTAAAAAACATTCCAAAATATGCACCAGCACAATTTTACATTGATAATGTTCTGCCACGGATCAAGGAGAAGAAGATTATGGCTCTGAAACCGTTTGTTGACAGGCTGGGATATGATAATGTTCCTCCTGAAATCAACAAGCTGAGATGTAGAGTTAATTATCATGCGCTGAAATTTCTTCCTGATATAGAGCAGATGGCTGATTCACTGGCATCGAGAATGAGAAACCAAACTGGCAGTTCAAATCCTTATATGGCTTTGCATCTTAGATTTGAGAAAGGAATGGTGGGATTATCATTCTGTGATTTTGTGGGGACAAGAGAGGAGAAAGTCAAAATGGCTGAGTATAGAAAAAAGGAGTGGCCTCGACGGTACAAGAATGGTTCCCACCTGTGGCAATTAGCTCTGCAGAAGCGTAAGGAAGGACGATGTCCTCTAGAGCCTGGAGAAGTGGCCGTTATTCTTCGGGCTATGGGCTATACTAAGGAAACTCAAATTTACGTAGCTTCTGGCCAGGTGTATGGTGGACAGAACCGGATGGCTCCACTAAGAAATATGTTCCCTAATCTGGTTACGAAGGAGGAGCTAGCAACCAAAGATGAGTTAGATGGTTTCCGAAAGCATGTGACAAGCCTAGCAGCTCTTGACTTCTTAGTGTGCTTGAAGTCAGATGTATTCGTGATGACCCATGGAGGCAACTTTGCCAAGCTGATTATTGGCGCCCGTAGATACATGGGTCACCGTCTAAAGTCAATTAAGCCTGACAAAGGGCTAATGTCGAAGTCTTTTGGGGACCCGTACATGGGTTGGGCTACTTTTGTAGAAGATGTTGTTGTTACTCACCAGACGCGGACGGGGTTGCCAGAAGAGACTTTCCCTAACTATGACCTCTGGGAGAACCCTCTGACTCCATGCATGTGTAGAGCCTGA 1662 0.4639 MAELRHSSSLGSRASNSPMKRDAVAVGGAGDSSPLIPDSHLADDDEHDRHSSKERDRHVCSFLNDDPRVSPHHSRISLFFTFLLLLVGLVSVFTIFHKLNAPYLCKKDGIVLHCPHVKESPSLWENPFSSTTSWRPCAERRDGVLSELPHENETNGYIFIHAEGGLNQQRIAICNAVAVAKIMNATLILPVLKQDQIWKDQTKFEDIFDVDHFIDYLKYDVRIVRDIPTWFTDKSELFSSIRRTVKNIPKYAPAQFYIDNVLPRIKEKKIMALKPFVDRLGYDNVPPEINKLRCRVNYHALKFLPDIEQMADSLASRMRNQTGSSNPYMALHLRFEKGMVGLSFCDFVGTREEKVKMAEYRKKEWPRRYKNGSHLWQLALQKRKEGRCPLEPGEVAVILRAMGYTKETQIYVASGQVYGGQNRMAPLRNMFPNLVTKEELATKDELDGFRKHVTSLAALDFLVCLKSDVFVMTHGGNFAKLIIGARRYMGHRLKSIKPDKGLMSKSFGDPYMGWATFVEDVVVTHQTRTGLPEETFPNYDLWENPLTPCMCRA* 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2639 553 MobiDBLite consensus disorder prediction 1 56 - -
Pvu1g2639 553 CDD O-FucT_plant 157 492 IPR024709 -
Pvu1g2639 553 MobiDBLite consensus disorder prediction 38 56 - -
Pvu1g2639 553 Gene3D - 296 496 - -
Pvu1g2639 553 PANTHER O-FUCOSYLTRANSFERASE 2-RELATED 1 553 - -
Pvu1g2639 553 PIRSF UCP009360 38 553 IPR024709 -
Pvu1g2639 553 Pfam GDP-fucose protein O-fucosyltransferase 157 489 IPR019378 -
Pvu1g2639 553 PANTHER PROTEIN PECTIC ARABINOGALACTAN SYNTHESIS-RELATED 1 553 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2639 Pvu-Chr1 51219731 51225214 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g2639 123 552 Miscellaneous Gene Families AT1G22460 35.307 3.30e-92 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2639 - - vra:106753406 1098.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2639 1 51219731 51225214 Pvu1g2639 1 51219731 51225214 ECH