Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2627 ATGGGACTTGTTTTCACCAAATGGGCATGTGCATTCTTACTCTGCTGTTGTTTCATCACTTCTGGGGTATATTCAGTGGAGGTGTTACATGGGGGTTCTAAAGTGAGAGGAGTGAACTTGGGAGGGTGGCTGGTCATCGAAGGTTGGATCAAGCCTTCACTGTTTGATGGCATTGCCAATGGAGACATGCTAGATGGGACAGAGGTGCAATTTAAGTCAGTGACGACGCAGAAGTATGTATCTGCCGAGAATGGGGGAGGAATGAATGTGACAGTTGACAGGGATGTCCCATCTTCATGGGAAACCTTCAGGTTATGGAGGGTATCTGAATCAGAATTTCAATTTCGTACCTCAGTGGGCCAATTTCTTACGTGTGATGGTGGAGGCCATTCTGTCTCTGCAACAGCAAAATCTCCTTCAACATCTGAGACATATGAAATTGAGCGGAGTGCAAAAAATAGGATTCACCTCAAGATAAAGGGTGGTGCATATCTTCAGGCTACAACAGATGGCCAGCTTTCGGCAAACTACCCTGGAACACCAGGATGGGATGATAATGCTGCCACGTTTGAAATGACAATTGTGTCAAATAGCTTGCATGGAGATTACCAGCTAGCAAATGGACATGGGCATAATCGGGCAAAAGACGTTCTAAGGAGACATAGAAATAGCTTTATCACGATAGAGGATTTCAAATTTCTATATAAACATGGAATAAATACTGTGAGGATACCAGTTGGGTGGTGGATTGCTTTTGATCCTGATCCTCCGGGTCCATATATCGGAGGCAGTCTTGAAGCTCTAGATAATGCATTTTTATGGGCACAAGAATATGATATAAAATGCATAATTGACCTTCATGCTGCTCCTGGTTCCCAAAATGGAATGGAGCATAGTTCAAGCAGAGATGGATTCACGGGCTGGCCAACTTCTCCAGATTACATTTCTGAGTCATTACATGTTATTGATTTTTTAGTTTCAAGATATGCAAAACATCCTTCCCTGCTGGGAATTGAGCTATTGAATGAACCATCAGCTGGCACAGTTTCATTAGATGTTTTGATTCCGTATTATAAGCAGGGCTACCAAATTGTCCGCAAGTACTCGTCATCGGCTTATGTGATAATCTGCCAGAGAATTGGTGTTGCAGATCCTTTGGAACTATATCAAGCCAACATAGGATCTCACAACATAGTTTTGGATTTGCATTTCTACAATCTCTTTGACCCATTCTTTGTTAATATGAGTGCTGTAGATAATATTCAATACATATACAAAAGTCGGGAGGGTCAACTGCAAGCCTTAAACAATTCAGATGGCCCACTTGTTTTAGTTGGAGAGTGGGTTAATGAGTGGAACGTGACAAACGGATCCCAGAAAGATTATCAGGACTTTGGAAGGGCACAGTTAGATGTCTATAATGCAGCTTCCTTTGGATGGTGTTATTGGACAGTAAAAAATGACAGAGAACACTGGGATTTTGAATGGAACATTAGGAACAGCTATCTTCAATTGGGTAACTCATCCAGCAAACGGAGCTTGAACATTCTAGGATTGTTAGGATTGGCATTCACCTGGTTTTGTTTACTTCAATTTTTGTGA 1602 0.4189 MGLVFTKWACAFLLCCCFITSGVYSVEVLHGGSKVRGVNLGGWLVIEGWIKPSLFDGIANGDMLDGTEVQFKSVTTQKYVSAENGGGMNVTVDRDVPSSWETFRLWRVSESEFQFRTSVGQFLTCDGGGHSVSATAKSPSTSETYEIERSAKNRIHLKIKGGAYLQATTDGQLSANYPGTPGWDDNAATFEMTIVSNSLHGDYQLANGHGHNRAKDVLRRHRNSFITIEDFKFLYKHGINTVRIPVGWWIAFDPDPPGPYIGGSLEALDNAFLWAQEYDIKCIIDLHAAPGSQNGMEHSSSRDGFTGWPTSPDYISESLHVIDFLVSRYAKHPSLLGIELLNEPSAGTVSLDVLIPYYKQGYQIVRKYSSSAYVIICQRIGVADPLELYQANIGSHNIVLDLHFYNLFDPFFVNMSAVDNIQYIYKSREGQLQALNNSDGPLVLVGEWVNEWNVTNGSQKDYQDFGRAQLDVYNAASFGWCYWTVKNDREHWDFEWNIRNSYLQLGNSSSKRSLNILGLLGLAFTWFCLLQFL* 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2627 533 PANTHER - 12 512 - -
Pvu1g2627 533 SUPERFAMILY (Trans)glycosidases 34 504 IPR017853 -
Pvu1g2627 533 Pfam Cellulase (glycosyl hydrolase family 5) 226 488 IPR001547 GO:0004553|GO:0071704
Pvu1g2627 533 PANTHER FASCIN 12 512 IPR010431 GO:0007015|GO:0051015
Pvu1g2627 533 Gene3D - 47 185 - -
Pvu1g2627 533 ProSitePatterns Glycosyl hydrolases family 5 signature. 336 345 IPR018087 GO:0004553|GO:0005975
Pvu1g2627 533 SUPERFAMILY Actin-crosslinking proteins 69 189 IPR008999 -
Pvu1g2627 533 Gene3D Glycosidases 186 513 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2627 Pvu-Chr1 51151035 51156201 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2627 - - vra:106755616 1076.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2627 1 51151035 51156201 Pvu1g2627 1 51151035 51156201 ECH