Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2621 ATGAATGTTTCGATGGTTTATTTACGTCGACCCTTCCTTGGGACGAATCTTTTGCGGTTAAAGAAAGGTTTGCTTGAGTTCGTTGTAGAGGCATTCCTCTACAATTTTGGAACGAAAGATCTTCGATTTTCCGACATCGCACTCATTTTTTTCTATATGTTTACCTGTTTTCTAATGTCATTGTTGGCTTTGGAACAGATGGCCCGTACAAAACAAACTGCTCGTAAATCAACTGGTGGAAAAGCTCCCAGGAAGCAGCTTGCTACCAAGGCTGCACGCAAGTCTGCGCCAACCACTGGTGGTGTGAAGAAGCCACATCGTTATCGTCCCGGTACTGTTGCTCTTCGTGAGATTAGGAAATACCAGAAGAGTACCGAGCTCCTGATCAGGAAACTCCCCTTCCAGAGGCTGGTTCGTGAAATTGCTCAGGATTTCAAGACCGATCTTCGTTTCCAGAGCCATGCTGTTCTAGCTTTGCAAGAGGCTGCGGAGGCATATCTTGTTGGGCTGTTTGAAGACACTAATTTGTGTGCCATTCATGCTAAGCGTGTGACTATCATGCCCAAGGATATCCAGCTGGCAAGAAGGATTCGTGGTGAACGTGCTTGA 609 0.4614 MNVSMVYLRRPFLGTNLLRLKKGLLEFVVEAFLYNFGTKDLRFSDIALIFFYMFTCFLMSLLALEQMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA* 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2621 202 ProSitePatterns Histone H3 signature 2. 133 141 IPR000164 GO:0000786|GO:0003677|GO:0030527
Pvu1g2621 202 PRINTS Histone H3 signature 69 83 IPR000164 GO:0000786|GO:0003677|GO:0030527
Pvu1g2621 202 PRINTS Histone H3 signature 83 97 IPR000164 GO:0000786|GO:0003677|GO:0030527
Pvu1g2621 202 PRINTS Histone H3 signature 100 121 IPR000164 GO:0000786|GO:0003677|GO:0030527
Pvu1g2621 202 PRINTS Histone H3 signature 124 141 IPR000164 GO:0000786|GO:0003677|GO:0030527
Pvu1g2621 202 PRINTS Histone H3 signature 146 164 IPR000164 GO:0000786|GO:0003677|GO:0030527
Pvu1g2621 202 PRINTS Histone H3 signature 164 180 IPR000164 GO:0000786|GO:0003677|GO:0030527
Pvu1g2621 202 PRINTS Histone H3 signature 180 201 IPR000164 GO:0000786|GO:0003677|GO:0030527
Pvu1g2621 202 MobiDBLite consensus disorder prediction 73 107 - -
Pvu1g2621 202 PANTHER HISTONE H3 47 202 IPR000164 GO:0000786|GO:0003677|GO:0030527
Pvu1g2621 202 Gene3D Histone, subunit A 68 202 IPR009072 GO:0046982
Pvu1g2621 202 Pfam Core histone H2A/H2B/H3/H4 67 198 IPR007125 GO:0003677
Pvu1g2621 202 PANTHER - 47 202 - -
Pvu1g2621 202 ProSitePatterns Histone H3 signature 1. 81 87 IPR000164 GO:0000786|GO:0003677|GO:0030527
Pvu1g2621 202 SUPERFAMILY Histone-fold 68 199 IPR009072 GO:0046982
Pvu1g2621 202 SMART h35 100 202 IPR000164 GO:0000786|GO:0003677|GO:0030527
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2621 Pvu-Chr1 51095359 51097599 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2621 K11253 - dcr:108205287 271.166
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2621 1 51095359 51097599 Pvu1g2621 1 51095359 51097599 ECH