Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2618 ATGACGTCCTCAGTAGTCGAAGGTGGAAGCGAAAAGCCCAAACGCCAACCCTCTGATTTCATTGCCGAAACCATGAATCTGACGGCTGAAAACCTTTCACTCACCACTGAAACATTCTTCAGAGCAGCAAGTTCCCTCAAGGACAAGGTTGTGGAGGAAACTTGGAACCGGAGAGACCAGGTGGTTGACCCGACGGTGTATTCGGGACTGTTGGGCACTGCCTTCACTTGTTTGCGGTCGTACCAGGTTACCGGTTGCCGGAACGACTTGCTGTTATGCAGAGATATCGTTGACACGTGTGTCACCGCTGCACGTGCCTCCCTCAGACACGTGACTTTTTTATGCGGTAGTGGAGGCGTTTATTCGCTTGGTGCCGTCGTTGCCAATTACATGGGGGACCTTGGAAAGCGTGACTTGTTTTTGGCTCTGTTCATTGAGGTGGCAAAAGAGAAAGCCCTACCAGTAGGACCAGAGGAAGGTGGTTTTGGAATGTCATATGATCTTCTGTATGGACGTGCTGGATTCTTATGGGGTGCATTATTCCTAAACAAGCACTTAGGAGAAGAATCAGTGCCAAAGGACATTCTTATACCTATTATTGATGCAGTGTTGGCTGGTGGTAGAGCAGGAGCATCTGATATTAAAAACTGTCCATTGATGTATAGATGGCATGGAACCAGGTACCTTGGTGCAGCAAATGGCCTTGCTGGTATCCTTCATGTGCTGCTTCATTTTCCACTTCCCACTGAGGATGCTGAGGATGTCAAGGGAACTTTGAGGTACCTCATGAGTAAGCGTTTTCCTCACAGTGGCAACTACCCCTCCAGTGAAGGGAATCCAAGGGACAAGTTAGTGCAATGGGGTCATGGTGCAACTGGCATGGCCATCACTTTGTCCAAAGCAGCACAAGTGTTTCCTAATGACAGAGAACTTCGAGATGCTGCAATAGAAGCAGGGGAAGTTGTGTGGAAAAGTGGATTGGTGAAGAAGGTGGGACTTGCAGATGGGGTATCTGGAAATGCCTATGCCTTCCTTTCCCTATACCAACTCACTAAAGAGAGCATTTACTTAGAGAGAGCAAAATCATTCGCTTCCTTCTTGTATGACAATGCAAAATCTCTGGCTCCTTCCAATGGCTACTCTCTCTTCCAAGGTCTTGCTGGAACAGCATGCCTCTGGTTTGATCTGCATGCACCCCAAAACTCTAGGTTCCCAGGTTATGAACTATAG 1230 0.4797 MTSSVVEGGSEKPKRQPSDFIAETMNLTAENLSLTTETFFRAASSLKDKVVEETWNRRDQVVDPTVYSGLLGTAFTCLRSYQVTGCRNDLLLCRDIVDTCVTAARASLRHVTFLCGSGGVYSLGAVVANYMGDLGKRDLFLALFIEVAKEKALPVGPEEGGFGMSYDLLYGRAGFLWGALFLNKHLGEESVPKDILIPIIDAVLAGGRAGASDIKNCPLMYRWHGTRYLGAANGLAGILHVLLHFPLPTEDAEDVKGTLRYLMSKRFPHSGNYPSSEGNPRDKLVQWGHGATGMAITLSKAAQVFPNDRELRDAAIEAGEVVWKSGLVKKVGLADGVSGNAYAFLSLYQLTKESIYLERAKSFASFLYDNAKSLAPSNGYSLFQGLAGTACLWFDLHAPQNSRFPGYEL* 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2618 409 Pfam Lanthionine synthetase C-like protein 61 409 IPR007822 -
Pvu1g2618 409 PANTHER LANC-LIKE PROTEIN GCL1 17 409 - -
Pvu1g2618 409 PRINTS Eukaryotic LanC-like protein family signature 196 211 IPR020464 -
Pvu1g2618 409 PRINTS Eukaryotic LanC-like protein family signature 264 279 IPR020464 -
Pvu1g2618 409 PRINTS Eukaryotic LanC-like protein family signature 302 323 IPR020464 -
Pvu1g2618 409 PRINTS Eukaryotic LanC-like protein family signature 347 365 IPR020464 -
Pvu1g2618 409 PRINTS Eukaryotic LanC-like protein family signature 395 409 IPR020464 -
Pvu1g2618 409 PANTHER LANC-LIKE PROTEIN 17 409 - -
Pvu1g2618 409 PRINTS LanC-like protein superfamily signature 63 81 IPR007822 -
Pvu1g2618 409 PRINTS LanC-like protein superfamily signature 166 181 IPR007822 -
Pvu1g2618 409 PRINTS LanC-like protein superfamily signature 228 244 IPR007822 -
Pvu1g2618 409 PRINTS LanC-like protein superfamily signature 284 304 IPR007822 -
Pvu1g2618 409 PRINTS LanC-like protein superfamily signature 331 344 IPR007822 -
Pvu1g2618 409 PRINTS LanC-like protein superfamily signature 379 396 IPR007822 -
Pvu1g2618 409 CDD euk_LANCL 66 405 - -
Pvu1g2618 409 Gene3D - 12 409 IPR012341 GO:0005975
Pvu1g2618 409 SUPERFAMILY LanC-like 53 409 - -
Pvu1g2618 409 SMART LANC_like_2 60 409 IPR007822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2618 Pvu-Chr1 51080135 51085154 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2618 - - gmx:100785406 745.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2618 1 51080135 51085154 Pvu1g2618 1 51080135 51085154 ECH