Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2604 ATGGGAAAGAGGCAATCTCTACGCAACAAAGCAACCCACTTTGTTTCTGTCCTTCTTAACCCCATCTCGGACTCCGACACTCCCAGACCCTCCAAACACCCTCCACCCACTCCAACACCAACACCTCCTTCCGAAGAAGTAGGTGGGTCAGAGAATGATGAAGAGGTTAACCGTGGTTTAGGTGATGGGCCAGATACTTCATCCTTCACTGCGTTTCTCTATTCCTTCTTGTCTTCCTCTGACACTGGAGATAATGCAAGCTCGCACGCGCAGAGTGATGATAACAGAGGTGCTGCACCTGATCACAACCCTCTACCAGACTCGTTGCTGAAGGAAAATGGTGGGAGGAAAAGTTTGTTTTCCAAAAGCAAGCAATCACTTGGCAGAGCCATTCGCAAAATTGGTGGTTTTCGCTATCATGATCGCAGAGATAACCTTGAAATGAAATTGGACGACGGGAGTGGTTCTAAGACTTCTGGTGTTGTTGAGATGAGGCGTATTGAACCTGTGCAAGAGTCTGTGACTGTTGTACCTTTGGTTGATCTTCCAGAAATTTCTGAGCCTTCGGTTCTTCTTTCAGATAGTATGAGGAATGTTCTATATGTTTCTCTTCCACCGCTTATTCACGGAAGGAAATGGTTGTTGTTATACAGCACTTGGAGGCATGGTATATCACTTTCCACTCTTTACCGGAGAAGCATGATTTGGCCTGGATTGAGTTTGCTGATTGTTGGAGATAAAAGAGGAGCAGTTTTTGGCAGCATTGTTGAAGCACCTCTCAGATCATCTAGCAAGAAAAAATACCAGGGAACGAACAACACATTTGTTTTCACAAATATCTCTGGTCATCCTGTTATATATCGTCCAACAGGATTGAATCGCTATTTCACACTTTGCAACTCTGACTATTTAGCAATTGGCGGAGGAGGTCATTTTGCACTTTATTTGGATGGTGATCTATTGAATGGTTCAAGTTCAGTCTCAGAAACTTATGGGAATCCTTGCCTCGCAAATTCTCAAGACTTTGAAGTGAAGGAAGTAGAGTTATGGGGCTTTGTATATGCTTCAAAGTATGAGGAAGTGCTTGCAATGAGCAGAACAGAAGCACCTGGGATCTGCCAATGGTAA 1128 0.4415 MGKRQSLRNKATHFVSVLLNPISDSDTPRPSKHPPPTPTPTPPSEEVGGSENDEEVNRGLGDGPDTSSFTAFLYSFLSSSDTGDNASSHAQSDDNRGAAPDHNPLPDSLLKENGGRKSLFSKSKQSLGRAIRKIGGFRYHDRRDNLEMKLDDGSGSKTSGVVEMRRIEPVQESVTVVPLVDLPEISEPSVLLSDSMRNVLYVSLPPLIHGRKWLLLYSTWRHGISLSTLYRRSMIWPGLSLLIVGDKRGAVFGSIVEAPLRSSSKKKYQGTNNTFVFTNISGHPVIYRPTGLNRYFTLCNSDYLAIGGGGHFALYLDGDLLNGSSSVSETYGNPCLANSQDFEVKEVELWGFVYASKYEEVLAMSRTEAPGICQW* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2604 375 MobiDBLite consensus disorder prediction 28 43 - -
Pvu1g2604 375 MobiDBLite consensus disorder prediction 9 27 - -
Pvu1g2604 375 MobiDBLite consensus disorder prediction 80 124 - -
Pvu1g2604 375 SMART 109ultra 189 353 IPR006571 -
Pvu1g2604 375 ProSiteProfiles TLDc domain profile. 190 353 IPR006571 -
Pvu1g2604 375 PANTHER TLD-DOMAIN NUCLEOLAR PROTEIN 1 369 - -
Pvu1g2604 375 PANTHER NUCLEOLAR PROTEIN 7/ESTROGEN RECEPTOR COACTIVATOR-RELATED 1 369 - -
Pvu1g2604 375 MobiDBLite consensus disorder prediction 1 65 - -
Pvu1g2604 375 Pfam TLD 215 352 IPR006571 -
Pvu1g2604 375 MobiDBLite consensus disorder prediction 80 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2604 Pvu-Chr1 50970095 50973955 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g2604 212 361 EF-hand Containing Proteins AT5G06260 30.000 2.24e-13 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2604 - - gmx:100804124 633.254