Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2598 ATGGTGAAACCTGGTTGTGGCTTAATAACAATAATATTTGGACGAAACAAATCAGTCTCTGCAGGTTCTTCTCCCATTGCCAACAATTTTGAAAATTTACCAAAAGATGAAAAATGGGAATGTGTTGGTTCTAAAGATTTTGTTTCAAATAATGATGTTACAAACTCCTCATCTCATTCAATCTCCAATCCTCATAAGCCAACTCGTGTTGTTAGCCATGGGAAACCACAAAATTTGAATGAAATAAAAAGGAGAAAACCCTCACCCACTCAAGGTTATGTGAATCAAGGAAGAAGGGTTCCAAAAGAAGTTGATGGTATCTTTGATGAACTTGAAAGCATGATCAATGATCAACTAGTGTCCAAGAGAGGTAATAGCCCTGCTCAAGCTTCTTCCAACAATGTGATGTTGTATGGTAATTTAGGTAACCTCGGAGGAGGGGGAGGTGGATTGGATCATAAATATTACAGTGAAATGAATTATAGTGTTGGTAATGTTTCAAAGAGAGGACATGAATATGGTAATAGTAATTATAATAAAAAAACCAAACGAAGCAAGGAACCATCAGATTTTCTATGCAGGACTTTGTCTACAAAAATGGATCCTGAGCGATTGAAAATAATGGGCAATGAAGATTACAAGAATGGAAGGTTTTGCGAGGCATTAGCCTTGTATAACAAAACTGCTGCACTAACTGCTCTTGGTAGGCTTTTGGAGGCTGTTTTTGAATGCAGGGAAGCCATTCAAATTGAGCCTTGTTACCATAGAGCACACAATCGATTGGGAAAATTGTATTTCAGATTAGGAGAAACAGATAAGGCTTTGTATCATTATAAACAAGCTGGAGCAGAAGCTAATTCAGATGAGATTGCTAAAGTAAAGATTCTCCAAGTATATCTAAACAAATGTTCAAAGACTCTTAAGTTGGGTGATTGGAACACACTTATAACTGAAACCAACATCATTCTATCATCTGGTGCAGATTCTGCTCCACAAATATATACCTTACAAGCCGAAGCCCTACTAAAGCTTCATAAACATGAAGATGCAGACAAAGTAATGTCAAAATGCCCAAAATTTGAAGTTGATGAGTACACTAAGTTCTTTGGACCAATTGGTAATGCAAACTTATTGGTGAAATGGGCTCAAGTTGATTTAGTTAATGGCAGGTTTGAAAATGCCTTGGAAGGAGTAGAAAAAGCAATTAAGTCAGATCCTAATAGTAAGGAAGCACATAAGGTGGTAAGAAAAACTCAAGCTGTGACAAGTGCTCGTGCAAAAGGAAATGAGCTTTTCAAGGTAGCAAATTTTAAGGAGGCTTGCATTGCCTATGAAGAAGGCCTTGAACATGATTTATATAACTCTATTCTACTGTGCAATAGAGCTGCTTGTAGATCAAAGTTGGGCCAATTTGATAAAGCAATGGATGATTGCACCATTGCCCTTAACTTGCGTCCCTCTTATAGGAAGGCTAGGTTGAGAAGGGCAGATTGTAGTGATAAGTTGAAAAGATGGGAAACTTCAATACAAGATTACAGAATCTTGTTAAAAGAGACACCAGAAGATGAAGAAATAAAACAAGCATTGTTGAAAGTTCAGACACAGATTGAGAAACAAGATCAAGATCCTGAAAGAACTGAGACATATGAAACATTGTAA 1659 0.3689 MVKPGCGLITIIFGRNKSVSAGSSPIANNFENLPKDEKWECVGSKDFVSNNDVTNSSSHSISNPHKPTRVVSHGKPQNLNEIKRRKPSPTQGYVNQGRRVPKEVDGIFDELESMINDQLVSKRGNSPAQASSNNVMLYGNLGNLGGGGGGLDHKYYSEMNYSVGNVSKRGHEYGNSNYNKKTKRSKEPSDFLCRTLSTKMDPERLKIMGNEDYKNGRFCEALALYNKTAALTALGRLLEAVFECREAIQIEPCYHRAHNRLGKLYFRLGETDKALYHYKQAGAEANSDEIAKVKILQVYLNKCSKTLKLGDWNTLITETNIILSSGADSAPQIYTLQAEALLKLHKHEDADKVMSKCPKFEVDEYTKFFGPIGNANLLVKWAQVDLVNGRFENALEGVEKAIKSDPNSKEAHKVVRKTQAVTSARAKGNELFKVANFKEACIAYEEGLEHDLYNSILLCNRAACRSKLGQFDKAMDDCTIALNLRPSYRKARLRRADCSDKLKRWETSIQDYRILLKETPEDEEIKQALLKVQTQIEKQDQDPERTETYETL* 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2598 552 MobiDBLite consensus disorder prediction 52 67 - -
Pvu1g2598 552 ProSiteProfiles TPR repeat profile. 375 408 IPR019734 GO:0005515
Pvu1g2598 552 Pfam Tetratricopeptide repeat 257 288 IPR019734 GO:0005515
Pvu1g2598 552 PANTHER TPR REPEAT-CONTAINING THIOREDOXIN 3 540 IPR044534 -
Pvu1g2598 552 PANTHER OS01G0616333 PROTEIN 3 540 - -
Pvu1g2598 552 Gene3D Tetratricopeptide repeat domain 201 541 IPR011990 GO:0005515
Pvu1g2598 552 MobiDBLite consensus disorder prediction 52 75 - -
Pvu1g2598 552 ProSiteProfiles TPR repeat profile. 255 288 IPR019734 GO:0005515
Pvu1g2598 552 SMART tpr_5 375 408 IPR019734 GO:0005515
Pvu1g2598 552 SMART tpr_5 455 488 IPR019734 GO:0005515
Pvu1g2598 552 SMART tpr_5 221 254 IPR019734 GO:0005515
Pvu1g2598 552 SMART tpr_5 255 288 IPR019734 GO:0005515
Pvu1g2598 552 SMART tpr_5 421 454 IPR019734 GO:0005515
Pvu1g2598 552 SMART tpr_5 489 522 IPR019734 GO:0005515
Pvu1g2598 552 SMART tpr_5 331 360 IPR019734 GO:0005515
Pvu1g2598 552 SUPERFAMILY TPR-like 202 412 IPR011990 GO:0005515
Pvu1g2598 552 SUPERFAMILY TPR-like 425 541 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2598 Pvu-Chr1 50916779 50920516 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2598 - - gmx:100811282 673.315
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2598 1 50916779 50920516 Pvu1g2598 1 50916779 50920516 ECH