Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2589 ATGGCCAGTGCACTGCATAACGCCGCCATCTCCACAATCACGTTTGGAGACCAATATTCCATTTCTCGTTGCCTTTTTCCATCCCTCTCCACACTTCCTGTCAGATCCATGCAAAAAAGAAATCACGTAGAGCTGAACAAAATGGTGGTAGTGGTAAAGGCAAAGAATAAGGGTGATTTGGATGACATAGAAGTTGATGTTTCTTTGAGCCACAGAGTTAATGCTGTCAAGCCTTCCAAAACTATGGCTATAAGTGATCATGCCACTGCTCTTTCTCAAGCTGGAGTTCCCGTTATTCGCTTAGCTGCTGGAGAACCTGATTTTGACACACCCGCTGTTATAGCTCAGGCTGGAATGAATGCAATTCGTGACGGTTACACTAGATATACTCCTAATGCTGGAACCTTAGAATTACGCCAAGCAATATGTCACAAGCTAAAAGAGGAGAATGGAATTACATATACCCCAGATGAGATTGTGGTCAGTAATGGAGCCAAGCAGAGTGTAGTTCAAGCGGTGCTTGCAGTTTGTTCCCCAGGAGATGAGGTTATTATTCCAGGTCCATTCTATGTGAGTTATCCAGAAATGGCAAGACTAGCAGATGCAAATCCAGTGATTATTCCAACCCACATATCTAATAACTTTCTTTTGGATCCAAAACTGCTTGAAGCCAACCTTACAGAAAGATCAAGACTACTTATTCTTTGTTCACCGTCTAACCCAACAGGATCTGTCTACTCTAAAAAATTACTTGAAGCAATAGCCCAAATTGTAGCAAAGCACCCTAGGCTTCTGGTTCTCTCCGATGAAATTTATGAACACATAATCTATGCACCAGCAACTCACACAAGCTTTGCATCTTTAACTGGAATGTGGGACAGAACACTAACCGTGAATGGGTTTTCCAAGACATTTGCCATGACTGGCTGGCGTCTTGGGTACATTGCTGGTCCAAGACACTTTGTTGCAGCCTGTGGGAAGATTCAAAGTCAGTTCACTTCAGGGGCAAGCAGTATATCTCAGAAAGCTGGTGTGGCTGCATTAGGACTAGGTTATGCAGGTGGGGAGGCTGTTTCTACCATGGTGAAAGCCTTCAAGGAAAGAAGGGACTTCTTGGTTGAAAGCTTTTCAAAAATGGATGGAGTGAAAATATCTGAACCACAGGGGGCATTTTATCTGTTCATTGATTTCAGCTCTTACTATGGAAGAGAAGCTGAAGGGTTTGGTTTAATTGAGAATTCTGATTCCCTCTGTCGATACCTGCTGGACAAGGGCCTGGTTGCAGTGGTGCCGGGAAGTGCATTTGGAGATGATAGTTGCATCCGCATTTCTTATGCAGAATCCCTTACTGTTTTAAAGACAGCAGTAGAGAGAATTAAGAAAGCCCTTATCCCTCTAAGCTTTGTTTAA 1410 0.4326 MASALHNAAISTITFGDQYSISRCLFPSLSTLPVRSMQKRNHVELNKMVVVVKAKNKGDLDDIEVDVSLSHRVNAVKPSKTMAISDHATALSQAGVPVIRLAAGEPDFDTPAVIAQAGMNAIRDGYTRYTPNAGTLELRQAICHKLKEENGITYTPDEIVVSNGAKQSVVQAVLAVCSPGDEVIIPGPFYVSYPEMARLADANPVIIPTHISNNFLLDPKLLEANLTERSRLLILCSPSNPTGSVYSKKLLEAIAQIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLTGMWDRTLTVNGFSKTFAMTGWRLGYIAGPRHFVAACGKIQSQFTSGASSISQKAGVAALGLGYAGGEAVSTMVKAFKERRDFLVESFSKMDGVKISEPQGAFYLFIDFSSYYGREAEGFGLIENSDSLCRYLLDKGLVAVVPGSAFGDDSCIRISYAESLTVLKTAVERIKKALIPLSFV* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2589 469 PANTHER GLUTAMATE-OXALOACETATE TRANSAMINASE5 61 465 - -
Pvu1g2589 469 SUPERFAMILY PLP-dependent transferases 69 463 IPR015424 -
Pvu1g2589 469 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 61 465 - -
Pvu1g2589 469 ProSitePatterns Aminotransferases class-I pyridoxal-phosphate attachment site. 300 313 IPR004838 GO:0003824|GO:0009058|GO:0030170
Pvu1g2589 469 Pfam Aminotransferase class I and II 97 459 IPR004839 GO:0009058|GO:0030170
Pvu1g2589 469 CDD AAT_like 99 461 - -
Pvu1g2589 469 Gene3D Aspartate Aminotransferase, domain 1 82 457 IPR015422 GO:0003824
Pvu1g2589 469 Gene3D - 128 350 IPR015421 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2589 Pvu-Chr1 50830382 50834509 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2589 K15849 - gmx:100780254 813.142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2589 1 50830382 50834509 Pvu1g2589 1 50830382 50834509 ECH