Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2586 ATGGGAGTTGGTGATTACTTGTCTGATCTAATGGGCACTGGCAGTGGCAACCACCAACACAACACCAAGAACAGAAAGCAATTACAGACCGTAGAGCTGAAGGTGATGATGGATTGTGATGGCTGTGTGCTAAAGGTTAAGAAAACTCTCTCTTCGTTAGATGGAGTAGAATCAGTGGAGATAAACAGGAAACAGCAGAAAGTGACTGTAACTGGTTATGTGGAAGCAAACAAGGTCCTAAAGAAGGCAAAGTCAACAGGGAAAAAGGCTGAGATATGGCCTTACGTGCCTTACAACATGGTGGCAAATCCTTATACTGTTCAAGCTTATGACAAGAAGGCTCCTCCAGGATACGTGAGGAGAGTGGATAACTCTGCCGCCATTGGAACAGTGACAGCAGCTTATGAAGATCCATACACCACCATGTTCAGTGATGAAAACCCAAATGCATGTTCTATCATGTAG 465 0.443 MGVGDYLSDLMGTGSGNHQHNTKNRKQLQTVELKVMMDCDGCVLKVKKTLSSLDGVESVEINRKQQKVTVTGYVEANKVLKKAKSTGKKAEIWPYVPYNMVANPYTVQAYDKKAPPGYVRRVDNSAAIGTVTAAYEDPYTTMFSDENPNACSIM* 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2586 154 PANTHER COPPER TRANSPORT PROTEIN ATOX1-RELATED 4 154 IPR045181 GO:0046872
Pvu1g2586 154 ProSiteProfiles Heavy-metal-associated domain profile. 37 92 IPR006121 GO:0046872
Pvu1g2586 154 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 20 4 154 - -
Pvu1g2586 154 Pfam Heavy-metal-associated domain 35 89 IPR006121 GO:0046872
Pvu1g2586 154 Gene3D - 15 94 - -
Pvu1g2586 154 CDD HMA 37 91 IPR006121 GO:0046872
Pvu1g2586 154 SUPERFAMILY HMA, heavy metal-associated domain 26 95 IPR036163 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2586 Pvu-Chr1 50817836 50819159 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2586 - - gmx:100780586 286.574
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2586 1 50817836 50819159 Pvu1g2586 1 50817836 50819159 ECH
Pvu2g2700 2 42873475 42874641 Pvu1g2586 1 50817836 50819159 PCT