Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2585 ATGCGTTGGCGGTTGCTGCTACTGTTGTTGTTGTTGGAGCTAACGGCACGCGCAATGCCGCTTTCCATCACGTTTTCCGCGCGCCTCGTTCACCGCTTCGCCGACGAAATCAAACCGGTTCGAATCCCGACCGGCGACTGGCCAGAGCGGCGGAGCTTGCGCTACTACCAGATGCTTCTCGCCGACGACATTCTCAGACGCAAGATCAAACTCGGAGGCGCTCGCTACCAGCTTCTGTTTCCTACTCACGGTAGCAAAACGTTGTCTCTAGGCAACGACTTCGGCTGGTTACATTACACGTGGATTGATATTGGAACACCGAGTACTTCGTTTCTCGTGGCGTTGGACGCAGGCAGTGATCTTCTTTGGATTCCGTGTGATTGCGTACAGTGTGCTCCATTGTCATCGAGTTACTATTCCAATCTGGATAGAGATCTGAATGAATATAGTCCGTCTCGATCGTTATCCAGCAAGCATCTATCTTGCAGCCATCACTTGTGTGATAATAGTTCGAATTGTAAAAGTTCCCAGCAGCAGTGTCCGTACATGGTCAGTTACTTGTCAGATAATACATCGAGTTCTGGATTGTTAGTTGAGGACATACTGCATCTTCAGTCTGGTGGCGGTTTATCAAACTCGTCTGTTCAGGCTCCAGTTGTTTTTGGGTGTGGTATGAAGCAAAGTGGCGGTTACTTGGATGGGGTTGCCCCCGATGGTCTATTAGGTTTGGGACCTGGGGAGAGTTCAGTTCCGAGTCTTCTTGCTAAGTCCGGATTAATCCACAATTCGTTTTCCTTGTGCTTTAATGAAGATGATTCTGGTAGAATGTTTTTTGGGGACCAGGGATCAACCATCCAACAGTCTACTCCGTTCTTGCCTTTGGATGGATTATATTCAACGTACATTGTTGGAGTGGAGTCATCTTGTATTGGGAACACTTGTCTTAAAATGACAGGTTTTAAAGCACAGGTTGATAGCGGAACGTCTTTTACATTTCTTCCTGGCCATGCCTATGGAGCAATAGCCGAGCAGTTTGATCAACAAGTAAATGGTTCAAGATCTAGCTTTGAAGGATCTCCTTGGGAGTATTGCTATGTACCCAGTTCACAAGAATTGCCAAAGGTTCCCAGCTTAACTCTCATGTTCCAGCAGAATAACAGTTTTGTGGTCTATAATCCCGTGTTTGTATTCTATGGCAATGAGGGAGTCATTGGATTTTGTTTAGCCATACAGCCAACAGAAGGGGATATGGGAACAATTGGACAGAACTTCATGACTGGATACCGTTTGGTATTTGATAGGGAAAACAAGAAGCTAGCGTGGTCACGCTCAAATTGTCAGGATCTGAGTATAGGTAAGAGGATGCCCCTTTCTCCAAATGAGACTTCACCAAACCCATTGCCTTCAGATGAGCAACAAAGAACGAACGGGCATGCAGTTGCTCCAGCTGTTGCTGGAAGAGCTCCCCACAAATCTTCAGCAGCTTTATCGCGGATGATTTCATCGTGCCGGGTATATTGGCACTGCTATTTGTTTCTTCTATTTCAACTTGTGTCTACCTCTTACTGA 1569 0.4646 MRWRLLLLLLLLELTARAMPLSITFSARLVHRFADEIKPVRIPTGDWPERRSLRYYQMLLADDILRRKIKLGGARYQLLFPTHGSKTLSLGNDFGWLHYTWIDIGTPSTSFLVALDAGSDLLWIPCDCVQCAPLSSSYYSNLDRDLNEYSPSRSLSSKHLSCSHHLCDNSSNCKSSQQQCPYMVSYLSDNTSSSGLLVEDILHLQSGGGLSNSSVQAPVVFGCGMKQSGGYLDGVAPDGLLGLGPGESSVPSLLAKSGLIHNSFSLCFNEDDSGRMFFGDQGSTIQQSTPFLPLDGLYSTYIVGVESSCIGNTCLKMTGFKAQVDSGTSFTFLPGHAYGAIAEQFDQQVNGSRSSFEGSPWEYCYVPSSQELPKVPSLTLMFQQNNSFVVYNPVFVFYGNEGVIGFCLAIQPTEGDMGTIGQNFMTGYRLVFDRENKKLAWSRSNCQDLSIGKRMPLSPNETSPNPLPSDEQQRTNGHAVAPAVAGRAPHKSSAALSRMISSCRVYWHCYLFLLFQLVSTSY* 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2585 522 MobiDBLite consensus disorder prediction 450 476 - -
Pvu1g2585 522 Pfam Xylanase inhibitor N-terminal 99 280 IPR032861 -
Pvu1g2585 522 Gene3D Acid Proteases 281 448 IPR021109 -
Pvu1g2585 522 SUPERFAMILY Acid proteases 92 447 IPR021109 -
Pvu1g2585 522 PANTHER ASPARTYL PROTEASES 7 463 IPR001461 GO:0004190|GO:0006508
Pvu1g2585 522 Pfam Xylanase inhibitor C-terminal 321 442 IPR032799 -
Pvu1g2585 522 PANTHER ASPARTIC PROTEINASE-LIKE PROTEIN 1 7 463 - -
Pvu1g2585 522 MobiDBLite consensus disorder prediction 450 486 - -
Pvu1g2585 522 Gene3D Acid Proteases 85 280 IPR021109 -
Pvu1g2585 522 PRINTS Pepsin (A1) aspartic protease family signature 104 124 IPR001461 GO:0004190|GO:0006508
Pvu1g2585 522 PRINTS Pepsin (A1) aspartic protease family signature 322 333 IPR001461 GO:0004190|GO:0006508
Pvu1g2585 522 PRINTS Pepsin (A1) aspartic protease family signature 418 433 IPR001461 GO:0004190|GO:0006508
Pvu1g2585 522 ProSiteProfiles Peptidase family A1 domain profile. 98 442 IPR033121 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2585 Pvu-Chr1 50809434 50814287 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g2585 91 449 Miscellaneous Gene Families AT1G44130 28.982 1.49e-26 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2585 - - gmx:100782209 940.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2585 1 50809434 50814287 Pvu1g2585 1 50809434 50814287 ECH