Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2558 ATGGGAAAATATCTTGAATCTGCGGCGAGGCTGGAGGAGCTATCGCGGATTGTGTCATCTGCGAAGCCCAATATCAGGCCGAAGGGGACGCTACCCAGATCGCCCAACCGTGTGTCCACGCCTCGAACTGCGACCCCATTTGGTGTTAAGGTCGAGCTTGCGGAAAAGATGGAACCTTTCGAAGAATGTAGGACACCCCTCGCGAAGGTTGTTGCCGATTGCGCCAAGCGGTGGTTCCAGGACACCCTCAGGGAGGCCAAGGCAGGGGATACTTCCATGCAGGTTTTGGTCGGTCAAATGTATAACTCTGGCTATGGTGTTCCAAGGGATCCCCAAAAGGGACATGGTTGGATTAGTAAAGCGGCAAAAAATCGGAATTCAGTGTGGAAAGTGTGTGGTAAACGGCCAGGTTACCGAGCAAGTGATTCAGATTCATGTGATCAGGAGAACAAAGATAAATCCTGTCCTTAA 471 0.5138 MGKYLESAARLEELSRIVSSAKPNIRPKGTLPRSPNRVSTPRTATPFGVKVELAEKMEPFEECRTPLAKVVADCAKRWFQDTLREAKAGDTSMQVLVGQMYNSGYGVPRDPQKGHGWISKAAKNRNSVWKVCGKRPGYRASDSDSCDQENKDKSCP* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2558 156 MobiDBLite consensus disorder prediction 21 44 - -
Pvu1g2558 156 PANTHER EXPRESSED PROTEIN 1 153 - -
Pvu1g2558 156 SMART sel1 91 126 IPR006597 -
Pvu1g2558 156 MobiDBLite consensus disorder prediction 140 156 - -
Pvu1g2558 156 SUPERFAMILY HCP-like 83 125 - -
Pvu1g2558 156 PANTHER TETRATRICOPEPTIDE-LIKE HELICAL DOMAIN-CONTAINING PROTEIN-RELATED 1 153 - -
Pvu1g2558 156 MobiDBLite consensus disorder prediction 135 156 - -
Pvu1g2558 156 Gene3D Tetratricopeptide repeat domain 48 131 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2558 Pvu-Chr1 50615783 50617222 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2558 - - gmx:100779520 260.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2558 1 50615783 50617222 Pvu1g2558 1 50615783 50617222 ECH