Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2557 ATGGCAAATGTTGTGGAAGTGAAAGTTGGTCTGCACTGTGACGATTGTATCAAGAAAATCCTGAAAGCCATAAAGAAAATGGAAGATATTGAAACGTATAACGTGGACACAGAACTGAACAAGGTGATCGTCACTGGCAACGTGACAACAGAAGAAGTGATCAGAGTCCTTCAAAAGATGGGCAAGAATGCAATTGCCTGGGAAGATGATGAAACTGATAAGTGA 225 0.4089 MANVVEVKVGLHCDDCIKKILKAIKKMEDIETYNVDTELNKVIVTGNVTTEEVIRVLQKMGKNAIAWEDDETDK* 75
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2557 74 PANTHER COPPER TRANSPORT PROTEIN ATOX1-RELATED 2 73 IPR045181 GO:0046872
Pvu1g2557 74 ProSiteProfiles Heavy-metal-associated domain profile. 10 66 IPR006121 GO:0046872
Pvu1g2557 74 PANTHER HEAVY-METAL-ASSOCIATED DOMAIN PROTEIN 2 73 - -
Pvu1g2557 74 SUPERFAMILY HMA, heavy metal-associated domain 3 68 IPR036163 GO:0046872
Pvu1g2557 74 Pfam Heavy-metal-associated domain 7 62 IPR006121 GO:0046872
Pvu1g2557 74 CDD HMA 10 64 IPR006121 GO:0046872
Pvu1g2557 74 Gene3D - 2 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2557 Pvu-Chr1 50613539 50614091 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2557 - - vra:106755969 136.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2557 1 50613539 50614091 Pvu1g2557 1 50613539 50614091 ECH
Pvu1g2557 1 50613539 50614091 Pvu8g2273 8 53233818 53235070 PCT