Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2555 ATGTCATCATCATCATCTTCTTCCCAAAGCCTCAAAATTGGCATAGTTGGATTCGGCACCTTTGGCCAATTTCTGGCCAAGACAATGATAAAACAAGGCCACTCTCTCACTGCAACTTCTCGATCCGATTACTCCGACCTCTGTCTCCAAATGGGCATTCATTTTTACGGGGATGTTACAGCATTTCTTGCTTCTGACATAGATGTCATAGTGTTGTGCACATCGATATTATCGCTATCCGAAGTTGTGGGGTCAATGCCACTCGCTTCCCTGAAGCGCCCAACACTCTTTGTTGATGTTCTTTCAGTCAAAGAGCACCCAAGAGAGCTTCTGCTACGAGAGTTGCCAGAGCACTCAGACATTCTCTGCACTCACCCTATGTTTGGACCTGTCAGTGGCAAGAATGGATGGAAAGGTCTCACTTTCATGTATGACAAAGTTCGGATTAGAAATGAAGCTATCTGCTCTAGTTTCATCCAAATTTTTGCCAGTGAGGGTTGCAAGATGGTGCAAATGACTTGTGAGGAACATGACAAAGCAGCTGCGAAGAGCCAATTTATCACACACACAATTGGCAGAACATTGGCAGAAATGGATATTAAATCCACACCTATTGACACTAAGGGCTTTGAGGAACTTGTTAAATTGAAGGAGACGATGATTGGAAATAGTTTTGATTTGTTCAGTGGATTATTCGTGTACAACAGATTCGCCAGACAAGAGCTGGAAAACCTTGAACATGCCTTGCAAAAAGTCAAAGAAACGCTGGTTGAAAGGAAGAACGAGGAGCAGGGTCAAGAAAAGAACTGA 810 0.4346 MSSSSSSSQSLKIGIVGFGTFGQFLAKTMIKQGHSLTATSRSDYSDLCLQMGIHFYGDVTAFLASDIDVIVLCTSILSLSEVVGSMPLASLKRPTLFVDVLSVKEHPRELLLRELPEHSDILCTHPMFGPVSGKNGWKGLTFMYDKVRIRNEAICSSFIQIFASEGCKMVQMTCEEHDKAAAKSQFITHTIGRTLAEMDIKSTPIDTKGFEELVKLKETMIGNSFDLFSGLFVYNRFARQELENLEHALQKVKETLVERKNEEQGQEKN* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2555 269 Gene3D - 1 178 - -
Pvu1g2555 269 Pfam Prephenate dehydrogenase, nucleotide-binding domain 32 134 IPR046826 -
Pvu1g2555 269 PANTHER AROGENATE DEHYDROGENASE-RELATED 2 267 IPR045011 GO:0006571|GO:0033730
Pvu1g2555 269 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 173 259 IPR008927 -
Pvu1g2555 269 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 9 172 IPR036291 -
Pvu1g2555 269 Coils Coil 235 262 - -
Pvu1g2555 269 ProSiteProfiles Prephenate/arogenate dehydrogenase domain profile. 11 269 IPR003099 GO:0004665|GO:0006571|GO:0008977
Pvu1g2555 269 PANTHER AROGENATE DEHYDROGENASE 1, CHLOROPLASTIC-LIKE 2 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2555 Pvu-Chr1 50602088 50604340 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2555 K15227 - gmx:100787362 439.884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2555 1 50602088 50604340 Pvu1g2555 1 50602088 50604340 ECH