Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2554 ATGAAGCCACACACTCAGGCTTCTTCTTTCGCCACCCCACTCCCGCACGTGCCCTTCTTTCGCGCCACCGCTTCCTCACGTGCCTCCCCGGCGGAGTCTCTTCATGCCGCCGCTGCCGACGAATTCCGTCGCATCTGGACTGCAAAACGCCGCCGCGTCCACCTGTCCGTCCGCCACTCCACTCGCGTCGCCGCGGCTTTGAATCCCGGCGGCTCCAATGGCGACGAGAGTCGACCTCGGAGCAGCCGGCGCGGCGTGCTGATGGCACCTTTCCTGGCCGCCGGCGCGTCGATTCTGTTAACGGCGGTTGCGAGGGCGGAGGATAAGGCGGCGGAACCGGCTCCGACAGCGCCGAAGCTGGAGGAGACGAAGAAGAAGGAGGAGGAGGAAGTGATAACGTCGAGGATTTACGACGCGGCGGTGATAGGGGAACCGTTGGCGATAGGGAAAGAGAAAGGGAAGGTGTGGGAGAAGTTGATGAATGCGCGAGTGGTGTATTTGGGGGAAGCGGAACAGGTTCCGGTTCGAGACGATAGGGAATTGGAGCTTGAAATTGTGAAGAATTTGCATAGGCGCTGTTCGGAGAAGGAAAAAAAATTGTCTCTTGCTCTTGAAGCTTTTCCCTCTAATCTTCAGGAACCGCTCAATCAGTATATGGATAAGAAGATAGATGGAGACACCTTGAAGTCTTATACGTTACATTGGCCACCTCAAAGATGGCAGGAGTATGAACCTATTCTGAGCTACTGTCGTGAAAATGGAATCCGTCTTGTCGCTTGTGGTACTCCACTGAAGATCTTAAGAACTGTCCAAGCAGAAGGAATTCGTGGGCTGACAAAGGAAGAACGTAAACTTTATGCTCCTCCAGCTGGTTCAGGCTTTGTATCAGGCTTTACTTCTATCTCACGTAGATCTTCAGTCGATAGTACTCTAAATCTGTCTATTCCTTTTGGTCCAAGCTCATATCTTTCTGCACAGGCTAAAGTAATTGAGGAGTATTCTATGTCTCAGATTATCTTACAAAATGTGGTTGATGGAGGGGCCACTGGTATGTTAGTTGTTGTGACTGGTGCAAGCCATGTTACGTATGGATCTAGAGGAACTGGAGTGCCAGCAAGAATTTCAGGAAAAATACAAAAGAAAAACCAAGTAGTTATATTACTCGATCCTGAACGACAATTCATTCGCAGAGAAGGAGAAGTTCCTGTGGCTGATTTTTTGTGGTATTCTGCTGCCAGACCCTGTAGCAGAAATTGTTTTGATCGTGCTGAGATTGCTCGCGTAATGAATGCTGCGGGGCAGAGGCGAGATGCCCTCCCACAGGATCTTCAAAAGGGAATTGATCTTGGTTTAGTATCTCCAGAGGTGTTGCAGAACTTCTTTGATCTAGAGCAGTATCCTCTGATTTCAGAACTCACTCACCGTTTCCAGGGTTTCAGGGAAAGATTGTTGGCAGATCCCAAATTCTTGCACAGATTAGCCATAGAAGAAGCCATATCAATAACAACTACATTGTTAGCGCAATACGAAAAGCGGAAAGAAAATTTTTTCCAAGAGCTTGACTACGTCATTACAGACACTGTCAGAGGATCAGTAGTTGATTTTTTTACAGTGTGGCTTCCTGCACCAACTTTGTCATTCCTTTCATATGCTGATGAGATGAAGGCACCTGACAACATTGGTTCTCTAATGGGACTTCTTGGTTCCATCCCGGACAATGCTTTTCAAAAGAATCCAGCAGGGATAAACTGGAATCTCAATCATAGAATTGCATCAGTTGTATTTGGTGGGCTAAAACTTGCCAGTGTTGGATTTATTTCAAGCATTGGAGCCGTGGCTTCATCAAATTCTCTATATGGATTTCGTAAATTCCTTAATCCAGCCGTTGTCACCGAACAACGGAATATAAGGTCACCAATACTCAAAACGGCTGTTATATATGCTTGCTTTCTTGGAATTTCTGCAAATCTCCGTTATCAGATAATTGCTGGGATAGTGGAGCATCGGATTTCTGATCAGTTTGCTTCCCAAACATTCCTTGTAAATATGCTTTCTTTTGTAGCACGGACAGTCAATTCCTATTGGGGAACCCAGCAATGGATTGACCTAGCGCGGTCTACTGGCCTGCAAGTTAGAAAGACAGAGTCGCCAACATCAGATTCTCCAAACGGTGCTGCAATTTTATGCAACGAAACAGAAGAAGCCACCATTGATGAGATAGAAAAATAA 2229 0.4702 MKPHTQASSFATPLPHVPFFRATASSRASPAESLHAAAADEFRRIWTAKRRRVHLSVRHSTRVAAALNPGGSNGDESRPRSSRRGVLMAPFLAAGASILLTAVARAEDKAAEPAPTAPKLEETKKKEEEEVITSRIYDAAVIGEPLAIGKEKGKVWEKLMNARVVYLGEAEQVPVRDDRELELEIVKNLHRRCSEKEKKLSLALEAFPSNLQEPLNQYMDKKIDGDTLKSYTLHWPPQRWQEYEPILSYCRENGIRLVACGTPLKILRTVQAEGIRGLTKEERKLYAPPAGSGFVSGFTSISRRSSVDSTLNLSIPFGPSSYLSAQAKVIEEYSMSQIILQNVVDGGATGMLVVVTGASHVTYGSRGTGVPARISGKIQKKNQVVILLDPERQFIRREGEVPVADFLWYSAARPCSRNCFDRAEIARVMNAAGQRRDALPQDLQKGIDLGLVSPEVLQNFFDLEQYPLISELTHRFQGFRERLLADPKFLHRLAIEEAISITTTLLAQYEKRKENFFQELDYVITDTVRGSVVDFFTVWLPAPTLSFLSYADEMKAPDNIGSLMGLLGSIPDNAFQKNPAGINWNLNHRIASVVFGGLKLASVGFISSIGAVASSNSLYGFRKFLNPAVVTEQRNIRSPILKTAVIYACFLGISANLRYQIIAGIVEHRISDQFASQTFLVNMLSFVARTVNSYWGTQQWIDLARSTGLQVRKTESPTSDSPNGAAILCNETEEATIDEIEK* 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2554 742 PANTHER PROTEIN RETICULATA-RELATED 5, CHLOROPLASTIC 1 741 - -
Pvu1g2554 742 Pfam Haem-binding uptake, Tiki superfamily, ChaN 155 374 IPR007314 -
Pvu1g2554 742 SUPERFAMILY EreA/ChaN-like 154 410 - -
Pvu1g2554 742 PANTHER PROTEIN RETICULATA-RELATED 2, CHLOROPLASTIC-RELATED 1 741 - -
Pvu1g2554 742 Gene3D - 147 413 - -
Pvu1g2554 742 Pfam Protein RETICULATA-related 481 665 IPR021825 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2554 Pvu-Chr1 50596545 50601849 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2554 - - gmx:100810366 1303.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2554 1 50596545 50601849 Pvu1g2554 1 50596545 50601849 ECH