Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2553 ATGGAATCCTCCGCTGCCATTCGATCCTTTCACTATCCCATGGGCACTATGTCCCATATGCGGCCTTCCTATGATAAACAAGTTGTAGTTCCCATCCACAATGTGCGATGGAACTCTAAAAGTAGACTTTTCATTCAGCATCTGGCATATGATCGGAAGCACATTAATTCCCACATGAAGGGGAGCACCACACTAGTTTCATGTGCAAAAACAGCTGAACCTATCAACACATCCAACTCTGATGATGCTTCTCCAGGTAGTACTCCACAAGGCTCATTGGAGAAAAAGCCTTTGCAAGCTGCTACTTTTCCTAATGGATTTGAGGATTTGGTATTAGAGGTGTGTGATGAGACTGAAATTGCTGAACTGAAAGTAAAGGTTGGAGATTTTGAAATGCATATTAAGCGAAACATTGGAGCAACAACGGTTCCATTGTCTAACATTTCACCAACGACTCCTCCACCTATCCCATCTAAACCTATGGATTCAGCACCTGGTACCCTGCCACCATCACCTCCAAAATCATCTCCAGAAAAGAAAAATCCAATTATAGATGCTTCCAGAAAGAAATCACCAATATTGACAGCATTGGAGGCTTCTGAGAGTGGTACTTACGTCTTGATACCATCTCCCACGGTTGGCTTCTTCCGTAGAGGTAGAACAGTGAAAGGAAAGAGACAACCTCCTATCTGTAAAGAGGGGGATTTTGTCCAAGAAGGGCAAGTCATAGGGTATTTGGATCAGCTTGGCTCTGGAAATCCGGTTAAGACTGATGTGACTGGACAAGTGTTGAAGCTACTTGTTGAGGATGGAGAGCCTGTTGGTTATGGAGACCCCCTTATTGCTGTCTTCCCATTAGACCTCAAGTGA 870 0.4402 MESSAAIRSFHYPMGTMSHMRPSYDKQVVVPIHNVRWNSKSRLFIQHLAYDRKHINSHMKGSTTLVSCAKTAEPINTSNSDDASPGSTPQGSLEKKPLQAATFPNGFEDLVLEVCDETEIAELKVKVGDFEMHIKRNIGATTVPLSNISPTTPPPIPSKPMDSAPGTLPPSPPKSSPEKKNPIIDASRKKSPILTALEASESGTYVLIPSPTVGFFRRGRTVKGKRQPPICKEGDFVQEGQVIGYLDQLGSGNPVKTDVTGQVLKLLVEDGEPVGYGDPLIAVFPLDLK* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2553 289 CDD biotinyl_domain 208 283 - -
Pvu1g2553 289 SUPERFAMILY Single hybrid motif 199 282 IPR011053 -
Pvu1g2553 289 MobiDBLite consensus disorder prediction 75 95 - -
Pvu1g2553 289 Pfam Biotin-requiring enzyme 226 281 IPR000089 -
Pvu1g2553 289 PANTHER IS A MEMBER OF THE PF|00364 BIOTIN-REQUIRING ENZYMES FAMILY-RELATED 1 285 - -
Pvu1g2553 289 MobiDBLite consensus disorder prediction 143 187 - -
Pvu1g2553 289 PANTHER BIOTIN/LIPOYL ATTACHMENT DOMAIN PROTEIN 1 285 - -
Pvu1g2553 289 Gene3D - 204 283 - -
Pvu1g2553 289 MobiDBLite consensus disorder prediction 148 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2553 Pvu-Chr1 50586094 50593240 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g2553 111 285 Acyl Lipid Metabolism Gene Families AT5G15530 27.841 1.60e-10 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2553 - - gmx:100792471 428.713
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2553 1 50586094 50593240 Pvu1g2553 1 50586094 50593240 ECH