Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2552 ATGCACCCGAACAAGAGAGAGAGTTACAAGTTTGCTTCATTCATGGCTTACACTTTTCCTGATGTGTTTTGCTGGATTCAGAAGCTTCCACCAATCTCAGAATGGGAAACAAATTCCATTTCTCTAAACATATGTTCTTCAAGCTCTTGCCAACCGTCTCTCACTCTCACCATAACCAAAAACCATCATTCTTCAAAACTCTACTTTGTCATTTCAGCAGACTGTAACACTCCTATCCATCTTTGGGCCTCAAAACCTTTCAAGCATGCAAAGTCCAAAACCGCCATGTTAATAGATGATGAAACCATTTCCAATTTCTTTGTTAATTTCAACCAGGCCATCCTCCTTTATGGCTCCAACAAGAACGCTCCCTTACTCAGGTTTCCAAAACTTGTCTCAACTCCCAACCTTTCAGACGTTTTCAATCTTTCTTTCTTCACTCTCTTGTTCCTAGTTTGTATATACGAAGCTCCTGCTGCAGATTTTCGTTCTAGGTGTATTAGCAACCTGAAAGACCACTTGACAGGTTTTGAGTCAAGAAAAGCATCAAACATACTGATGAAACTCTTGGGGTCTAACGTGGAAGAGTTGTGGATGCGTTCTGTGAACCTTGCAGTTACTAACTGGGTCGGGGAACAAGAAGCACATAGCAACCCCTTCAAAACACCTTGTCCTTTGTTTTCTTATGCATTTTCAGCATCTGGGTTGTGGAAAGTGCAGTTGTATTGTCCCCTCATAGTCATGGATGTTGAGAATTCAAAAAGTAATCCAGCTAGTGAGAGACTTCAATTCTCCCTCAAGTATCACCATGTGGAAGCTGTTCTTCAGTTCAATCACAAAGTCTTAATAAAAAAGGAGTGGGTTGAAATCATGGTGGACATTGACAACATAAGGTGTGATGTTATCAAATTGGTGAATGAATCTCTTATGAAGGAACGAGGGGCTGATGCAGGTGAAAAACATTTTCCTTCGAGAATATGTTTACAACTTACACCTATTGTCCAAAACCAAGTGTTGAGCCTATCGGTTGGGAAATCCTCGGAGAACCCACGAAAAGAATTCGGAGTTGACAAAAGTGTAGAAGCTTCGTTTGAGCCATCATCCATTCCTGTGGGACTTAGAGTGTCAGCTGGAGAGTCCACAACAGTGAGTTTGAAGCCTTGGAAATTTGAAGAATCTGTTTATGGGTACAGTGCAAATTTGAATTGGTTTCTTCATGACAGTGTGGATGGCAAAGAAGTTTTCTCATCAAAGCCTTCAAAGTGTGCTATGATTAACCCAAAGTCGTGGTTCAAAAATCGCTACTCAAGTGCTTTGCGACCTTTCACCAGGCAAGGAGGAGTTATTTTCGCAGGTGATGAATATGGGGAAAAAGTGTGGTGGAAAGTGGACAAAGAAGCCATAGGAAAAACAATAGAAATAGAGATTAGGGGTTGGATATGGTTAACATATTGGCCTAACAAGCGCATAACATTCCACACAGAAACTAGGAGATTAGAGTTTCGTGAAATAGTATATGTTCATGTTGTTTAG 1533 0.4077 MHPNKRESYKFASFMAYTFPDVFCWIQKLPPISEWETNSISLNICSSSSCQPSLTLTITKNHHSSKLYFVISADCNTPIHLWASKPFKHAKSKTAMLIDDETISNFFVNFNQAILLYGSNKNAPLLRFPKLVSTPNLSDVFNLSFFTLLFLVCIYEAPAADFRSRCISNLKDHLTGFESRKASNILMKLLGSNVEELWMRSVNLAVTNWVGEQEAHSNPFKTPCPLFSYAFSASGLWKVQLYCPLIVMDVENSKSNPASERLQFSLKYHHVEAVLQFNHKVLIKKEWVEIMVDIDNIRCDVIKLVNESLMKERGADAGEKHFPSRICLQLTPIVQNQVLSLSVGKSSENPRKEFGVDKSVEASFEPSSIPVGLRVSAGESTTVSLKPWKFEESVYGYSANLNWFLHDSVDGKEVFSSKPSKCAMINPKSWFKNRYSSALRPFTRQGGVIFAGDEYGEKVWWKVDKEAIGKTIEIEIRGWIWLTYWPNKRITFHTETRRLEFREIVYVHVV* 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2552 510 PANTHER - 15 509 - -
Pvu1g2552 510 PANTHER EXPRESSED PROTEIN 15 509 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2552 Pvu-Chr1 50582709 50585259 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2552 - - gmx:100782905 689.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2552 1 50582709 50585259 Pvu1g2552 1 50582709 50585259 ECH
Pvu1g2552 1 50582709 50585259 Pvu8g2275 8 53238737 53240475 PCT