Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2546 ATGCCTTCTTCCCTTCACTTCGATACCTTCAATCGCACCGCCTCCTCCGCCGCCATCGCCAACGGCCTAAACTGCCACAAACACTCTCAACCGCCGCCTCCCTCTCTCCTCGACGCGGTGGCGCGGCACCACGCCCACGTGGCGGGGCAGAACCAGTGCTGCTCCGTGGTGATCCAGGCGATCAGCGCGCCCGTCTCCGCCGTGTGGGCGGTGGTGCGGCGCTTCGACCACCCGCAGGGGTACAAAAACTTCGTGAAGAGCTGCCACGTCATCACCGGCGACGGCATTAGCGTGGGCGCCGTCCGCGAGGTGCGGGTGGTGTCGGGACTCCCCGCGGAGTGGAGCACCGAGCGTCTGGAGATCCTGGACGAGGAGCGGCACGTGATGAGCTTCAGCGTGGTGGGCGGCGAGCACCGGCTGAGGAATTACCGGTCGGTGACGACGCTCCACGCGAGCGGGAACGGGACGGTTGTTATGGAGTCGTACGTGGTGGACGTTCCGCAGGGTAACACGAAGGAGGAAACGTGCGTGTTCGTGGAGACCATCGTGCGTTGTAATTTGCAGTCGCTGGCTCAGATCGCTGAAAATAGGACCCCAATCTCTCAACACCATAACTGTTGA 621 0.6329 MPSSLHFDTFNRTASSAAIANGLNCHKHSQPPPPSLLDAVARHHAHVAGQNQCCSVVIQAISAPVSAVWAVVRRFDHPQGYKNFVKSCHVITGDGISVGAVREVRVVSGLPAEWSTERLEILDEERHVMSFSVVGGEHRLRNYRSVTTLHASGNGTVVMESYVVDVPQGNTKEETCVFVETIVRCNLQSLAQIAENRTPISQHHNC* 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2546 206 Pfam Polyketide cyclase / dehydrase and lipid transport 59 195 IPR019587 -
Pvu1g2546 206 Gene3D - 14 205 IPR023393 -
Pvu1g2546 206 PANTHER POLYKETIDE CYCLASE/DEHYDRASE AND LIPID TRANSPORTER 23 204 - -
Pvu1g2546 206 PANTHER - 23 204 - -
Pvu1g2546 206 SUPERFAMILY Bet v1-like 53 194 - -
Pvu1g2546 206 CDD PYR_PYL_RCAR_like 53 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2546 Pvu-Chr1 50540616 50541930 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2546 K14496 - gmx:100808416 319.701
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2546 1 50540616 50541930 Pvu8g2283 8 53309746 53310955 ECH
Pvu1g2546 1 50540616 50541930 Pvu1g2546 1 50540616 50541930 ECH
Pvu1g2546 1 50540616 50541930 Pvu8g2283 8 53309746 53310955 PCT