Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2545 ATGGAAAAATTGATGAAGGGAGGTTCTTGTTCCTCCTTCCCCTCACTTCGCTCTTCTTCTTACCTCTTCTTCATCACTCTCTTAGCTTTCATTCTCTTCATCTTTCATCCACACCTCCACTCCAACCAACAAACACAAACGCTCTTCTTCTCCACACCACTCCGTGTCGCCTCTTCAAACACAACAACGCTCACACAAACCCTAAGAGAGCAAGAAGGAGGCTGTGACGTGTTCCAGGGAAGGTGGGTGCGCGACGAGTTGACTCGCCCGCTGTACGAGGAATCGGATTGTCCCTACATACAGCCCCAGTTGACGTGTCAAGAACACGGTCGGCCGGAGAAGGAGTATCAACGGTGGCGATGGCAGCCTCACGGTTGCGATCTTCCCACATTCAATGCAAGTTTAATGCTGGAAAAGCTTCGTGGGAAGAGGATGATGTTTGTTGGAGACTCCCTCAACCGAGGTCAATATGTCTCTTTGATATGTCTTGTTCATCAACTTATTCCTGAACATGCCAAGTCCATGGAAACCTTTGGTTCCCTCACTATCTTTAGAGCCAAGGAATACAATGCCACAATTGAATTCTACTGGGCACCTTTTCTACTTGAATCAAACTCCGATGATGCTGTGATCCATAGGGTAACTGATAGAATAGTGAGAAAGGGTTCAATCAATACACATGGTCGTCACTGGAAAGGTGCTGACATTATTGTATTCAACACTTATCTTTGGTGGATAACTGGCTCTAATATGAAGATCTTGCTTGGATCATTTAAAGATGAAGTAAAGGAGATTGTTGAGATGTCAACAGAAGATGCTTATCGAATGGCTATGAAAAGTATGGTTAGATGGGTAAAGCTGAACATGGACTTCAACAAGACAAGAGTGTTCTTTAGCAGCATGTCACCTTCTCATGCAAAAAACATAGAGTGGGGAGGTGAATCAGAAGGGAACTGCTACAATGAAACAACACCAATTGATGATCCTACATATTGGGGTTCTGATTCTAAAAAAAGCATAATGCAAGTAATTGGAGAAGTGTTTGGAAAATCTAAAGTACCTATAACTTTTCTCAACATTACCCAACTTTCCAGCTACCGAAAAGATGCACATACATCAATTTACAAAAAGCAATGGAACCCATTGACTTCAGACCAAATAGCTAACCCTGCTACTTATGCTGATTGTGTGCATTGGTGTTTGCCTGGTCTTCAAGATACTTGGAATGAACTTTTGTTTGCTAAGTTCTGTTTTTCTTGA 1260 0.427 MEKLMKGGSCSSFPSLRSSSYLFFITLLAFILFIFHPHLHSNQQTQTLFFSTPLRVASSNTTTLTQTLREQEGGCDVFQGRWVRDELTRPLYEESDCPYIQPQLTCQEHGRPEKEYQRWRWQPHGCDLPTFNASLMLEKLRGKRMMFVGDSLNRGQYVSLICLVHQLIPEHAKSMETFGSLTIFRAKEYNATIEFYWAPFLLESNSDDAVIHRVTDRIVRKGSINTHGRHWKGADIIVFNTYLWWITGSNMKILLGSFKDEVKEIVEMSTEDAYRMAMKSMVRWVKLNMDFNKTRVFFSSMSPSHAKNIEWGGESEGNCYNETTPIDDPTYWGSDSKKSIMQVIGEVFGKSKVPITFLNITQLSSYRKDAHTSIYKKQWNPLTSDQIANPATYADCVHWCLPGLQDTWNELLFAKFCFS* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2545 419 PANTHER PMR5 DOMAIN, PC-ESTERASE, PROTEIN TRICHOME BIREFRINGENCE-LIKE 32/46-RELATED 18 416 - -
Pvu1g2545 419 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 18 416 IPR029962 GO:0016413
Pvu1g2545 419 Pfam PMR5 N terminal Domain 74 127 IPR025846 -
Pvu1g2545 419 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 128 414 IPR026057 GO:0016740
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2545 Pvu-Chr1 50528582 50532938 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2545 - - gmx:100782397 707.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2545 1 50528582 50532938 Pvu8g2284 8 53322757 53325699 PCT