Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2542 ATGCTTAAGCTTGGTTTTAATGGTGGGATGATTCATCAGCTTCTGGTTGTCTATATAAACCGCCAATTCTTGATCAAAGTTCGACACATCCTACGCTCCTTTGTTGCAGCAGTTCAGACATCCTACGATTTCGTCTCCATGGCCAATCCCAAATCCGAGTCAGTGTCGGAACCCTCAGTTTCAGAACCTCCACGGACGCAACCCTCTGTGCCCATTTCCTACCCAATAAAAACCCTCGAGGAGTTGGAGTCTCGCTCCTATTTCGACTCCTTTCACTACCCTTTCAACAGGGCCTCGGTTCCCATTCTCAATGGAGATTCTTCTTCATTGCCCCAGAGACGCAGATTGCTTGTGTGCCATGACATGGCTGGAGGCTACTTGGATGACAAGTGGATTCAAGGTGGCACAAACCCCGACGCTTATGCCATTTGGCATTGGCACTTGATCGATGTCTTTGTCTACTTTTCACACAGTCTCGTTACTCTTCCTCCTCCCTCCTGGACTAACACTGCTCATCGCCACGGTGTTAAGGTGTTGGGGACTTTCATTAGTGAATGGGATGAGGGAAGGGCTGTCTGTGATACACTGCTTTCAACGAAGGAAACTGCACATATGTATGCAGAACGTCTTGCAGAGCTTGCCGCTGATTTAGGTTTTGATGGGTGGCTAATAAATATGGAAGTGAATTTGGATCAAGGTCAAATTCCTAATTTGAAAGAGTTTGTAGACCATTTATCACTAACAATGCATTCTTCTGTGCCTGGATCGTTAGTACTATGGTATGACAGTGTTACAGTTGATGGTAAATTGAATTGGCAAGATCAACTAAATGAACAAAATAAGCCGTTCTTTGATATATGTGATGGAATATTCGTGAACTATACATGGAAGGAAGACTATCCAAGGCTCTCTGCTGCTGTTGCCAGTGAGCGGAAGTTTGATGTGTACATGGGAATCGATGTATTTGGAAGGAACACATATGGTGGTGGACAGTGGAATGTAAATGTTGCTCTTGATTTACTAAGAAAGAATGATGTCTCTGCTGCAATATTTGCTCCTGGATGGGTCTATGAGACAAAGCAAGCACCAGATTTTGAAACTGCTCAGAATAGTTGGTGGGGTCTTGTGGAAAAGTCATGGGGAGTACTGCGAAATTTTCCTGGACAATTACCATTCTACACTAATTTTGATCAGGGGCGTGGTTACCATATTTCAGTTGATGGTGACAATGTATCAGATACTGCTTGGTGCAACATTTCTAGCCAAGGTTTCCAGCCACAAATTAAGCTTGTCGATCCTGCAAATTCAATTCAAGTTTCTGTAGACTTGAAGGAAGCATCATATAGTGGAGGGGGAAACATTACATTCAAAGGATCCCTCGAAGACAAAACTTACTTTGAGAGCAAAATCTTTCAAGGAGGGTTTCTTTTGAGCGAGTTGCCTGTTCACTTTATGTATACTGTGAAATCAGATGGCAATTCTTCATTGGGACTTAAGCTCCAGTTCACCTCCACTGGCGGTGACAGAAGAGCATCTGTGCTTCTGGCATCCCGGGCAGTGAATCACTTTTCAAACAAGTTCAGCAAAGTGATCATGACTCGTGAACGTAAGGGACTTTCCTCTGGATGGGTTATAAATGAAGGTGTAATTGCAATGAATGGATACACTTTAACAGAAATCGATGCAGTGTGCTATAGATCAGATTCTTCAGTCAATGAAATAAGATGGCAACACAGATCAAATGACAATGATGGAACTTTGGCTTCCCCATCCGATTATTTTGCAGTTCTTGGACATATCACAATCAAGACTTCGGGCTATAGGTCAGATTTTCCTGTGTCTTCTTCCTGGCTATTTGATGGCACTTGCATAAAATGGACATCAGACCCCCAGGGTTCAAAGACCCTTGATGTTAAAATTTCTTGGAAGTTAAAAAATGAGAATAACTATCAATTTCTAAAGTTCAACGTTTACTTGGTAAAATTATCAAAACAAGCAGGTGGCAATCCAGGTACAGCATCAGAGGATGATGTAAAAGAGTACCTTGGAGTAGCACATGTAAGCTCTTTCTATGTTTCTGACCTCAAAGTTCCTTCAGACACTTCTACTCTCAAATTTATAATACAAGTCTGTGGTATAGATGGGACAATTCAGGAATTAGACGAGTCTCCATATTATGAATTGGAGGTTGAAGGTCCTTAA 2202 0.4223 MLKLGFNGGMIHQLLVVYINRQFLIKVRHILRSFVAAVQTSYDFVSMANPKSESVSEPSVSEPPRTQPSVPISYPIKTLEELESRSYFDSFHYPFNRASVPILNGDSSSLPQRRRLLVCHDMAGGYLDDKWIQGGTNPDAYAIWHWHLIDVFVYFSHSLVTLPPPSWTNTAHRHGVKVLGTFISEWDEGRAVCDTLLSTKETAHMYAERLAELAADLGFDGWLINMEVNLDQGQIPNLKEFVDHLSLTMHSSVPGSLVLWYDSVTVDGKLNWQDQLNEQNKPFFDICDGIFVNYTWKEDYPRLSAAVASERKFDVYMGIDVFGRNTYGGGQWNVNVALDLLRKNDVSAAIFAPGWVYETKQAPDFETAQNSWWGLVEKSWGVLRNFPGQLPFYTNFDQGRGYHISVDGDNVSDTAWCNISSQGFQPQIKLVDPANSIQVSVDLKEASYSGGGNITFKGSLEDKTYFESKIFQGGFLLSELPVHFMYTVKSDGNSSLGLKLQFTSTGGDRRASVLLASRAVNHFSNKFSKVIMTRERKGLSSGWVINEGVIAMNGYTLTEIDAVCYRSDSSVNEIRWQHRSNDNDGTLASPSDYFAVLGHITIKTSGYRSDFPVSSSWLFDGTCIKWTSDPQGSKTLDVKISWKLKNENNYQFLKFNVYLVKLSKQAGGNPGTASEDDVKEYLGVAHVSSFYVSDLKVPSDTSTLKFIIQVCGIDGTIQELDESPYYELEVEGP* 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2542 733 PANTHER BETA N-ACETYLGLUCOSAMINIDASE, PUTATIVE-RELATED 11 732 - -
Pvu1g2542 733 Pfam Glycosyl hydrolase family 85 126 403 IPR005201 GO:0005737|GO:0033925
Pvu1g2542 733 Gene3D - 388 548 - -
Pvu1g2542 733 PANTHER ENDO BETA N-ACETYLGLUCOSAMINIDASE 11 732 IPR032979 GO:0033925
Pvu1g2542 733 CDD GH85_ENGase 117 431 - -
Pvu1g2542 733 Gene3D Glycosidases 65 383 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g2542 66 731 Glycoside Hydrolase AT5G05460 55.440 0.0 741
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2542 K01227 - gmx:100804658 1222.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2542 1 50502661 50510131 Pvu1g2542 1 50502661 50510131 ECH