Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2538 ATGGCAATTTGGGTTGAAAGGCTGTTCCGAGAGAGAAAATGCCCCTTCATTTTCACCCTCTTGCTCTTTCTCATCTGTGTCACCATCCTCACATTCACCAGAAACGCAACCTCCACCTTGGATCCCATTGGCTTCTACCCTGATGTCAAACCGCAACCTCTCGCACATTTTTCTTCCCCGCCTCCCAAACCCCAAAGACTGCCACTCAAGGGAGAGCCTTTCTTGGATGATGCAAGCATTGATTGGAAGCTTTGTAAGGGTCCCTTGGCTGTGGATTATATACCCTGTTTGGACAACTTTAAGGCCATTAAGTCTCTCAGGTCAAGGAGGCACATGGAACACAGGGAAAGACACTGTCCTCATTCTCCTCCCCACTGTCTACTGCCCCTTCCCAGAGCCTACAAAGTCCCCCTTCTGTGGCCTAAGAGCAGGGACATGATTTGGTATGATAATGTTCCTCATCCGAAGCTGGTTGAATACAAGAAGGAGCAAAACTGGGTGGTGAAGTCCGGAGATTATCTCGTCTTTCCCGGAGGTGGTACTCAATTCAAAGAAGGAGTTAACCATTATACTGAATTCATACAGAAGACACTACCGGCAATCCAATGGGGAAAGAATATTAGGGTTGTTCTTGATGTTGGTTGCGGAGTTGCCAGCTTTGGTGGATATCTTCTGGACAAAAATGTTATTACTATGTCATTTGCACCAAAGGATGAGCATGAAGCTCAGATACAGTTTGCTTTGGAACGAGGAATTCCTGCAACTCTTTCTGTCATCGGAACTCAAAAGTTGACATTTCCTGACAATGGATTTGATTTGATCCATTGTGCAAGATGCAGGGTGCATTGGGATGCAGATGGTGGGAAACCTTTGTTTGAGCTGAACAGGGTTCTTAGACCTGGTGGTTTCTTTGCATGGTCTGCCACACCAGTTTATCGAGATGATGAAAGAGATCGCAAAGTATGGAATGCCATGGTGACCGTGACAAAAGCAATGTGCTGGACTGTTGTGGCTAAGACTCTCGATTCATCTGGCATTGGGCTTGTTATATACCAGAAGCCTACCTCATCTTCCTGTTATCACGAACGCAAAGAGAATAAACCTCCTTTATGTGAAGATAGCGATAAGAAAAGTATCTCATCCTGGTATGCGAGACTGAGTGGTTGCCTGATTCCTCTACCAGTTGATGGAGAGGGTAACCTTCAGAGCTGGCCAATGTCTTGGCCCCAAAGGCTTACTGGTATACCTCCAAGCTTATCGAGTGAATCAGAGGCCACTGAGAAGTTCTTGAACGACACCAAGCACTGGTCTGAGTTAGTTTCAGAAGTTTATAGAGATGGACTTTCTATAAACTGGTCAAGTGTTCGAAATGTAATGGACATGAATGCTGGTTATGGAGGATTTGGCACGACACTAATTGATCTACCAGTGTGGGTGATGAATGTAGTACCCATTGACATGCCAGATACTCTTACTACCATATTTGACCGAGGGCTAATAGGAATATATCATGACTGGTGCGAGTCCCTAAGCACATACCCTCGCACCTACGATCTTCTTCATGCAAGCTTTCTTTTCAAACATCTTCAGCAAAGATGTGACATTGTGGATGTGGTTGTGGAGATAGATCGCATACTGAGACCAGATGGGTATCTAGTGGTTCAGGATACTATGGAGATCATGAACAAGCTTGGTCCGGTTCTGCATTCACTTCATTGGTCTGTAACATTGTATCAAAATCAGTTTCTTGTTGGTAAGAAGACTTTATGGCGTCCAAAGCCTTAG 1785 0.4504 MAIWVERLFRERKCPFIFTLLLFLICVTILTFTRNATSTLDPIGFYPDVKPQPLAHFSSPPPKPQRLPLKGEPFLDDASIDWKLCKGPLAVDYIPCLDNFKAIKSLRSRRHMEHRERHCPHSPPHCLLPLPRAYKVPLLWPKSRDMIWYDNVPHPKLVEYKKEQNWVVKSGDYLVFPGGGTQFKEGVNHYTEFIQKTLPAIQWGKNIRVVLDVGCGVASFGGYLLDKNVITMSFAPKDEHEAQIQFALERGIPATLSVIGTQKLTFPDNGFDLIHCARCRVHWDADGGKPLFELNRVLRPGGFFAWSATPVYRDDERDRKVWNAMVTVTKAMCWTVVAKTLDSSGIGLVIYQKPTSSSCYHERKENKPPLCEDSDKKSISSWYARLSGCLIPLPVDGEGNLQSWPMSWPQRLTGIPPSLSSESEATEKFLNDTKHWSELVSEVYRDGLSINWSSVRNVMDMNAGYGGFGTTLIDLPVWVMNVVPIDMPDTLTTIFDRGLIGIYHDWCESLSTYPRTYDLLHASFLFKHLQQRCDIVDVVVEIDRILRPDGYLVVQDTMEIMNKLGPVLHSLHWSVTLYQNQFLVGKKTLWRPKP* 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2538 594 Gene3D Vaccinia Virus protein VP39 421 587 IPR029063 -
Pvu1g2538 594 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 119 325 IPR029063 -
Pvu1g2538 594 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 92 581 IPR004159 GO:0008168
Pvu1g2538 594 PANTHER PMT16, PUTATIVE-RELATED 4 593 - -
Pvu1g2538 594 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 447 573 IPR029063 -
Pvu1g2538 594 Gene3D Vaccinia Virus protein VP39 182 377 IPR029063 -
Pvu1g2538 594 CDD AdoMet_MTases 210 304 - -
Pvu1g2538 594 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 4 593 IPR004159 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2538 Pvu-Chr1 50466278 50472041 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2538 - - gmx:100808221 1073.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2538 1 50466278 50472041 Pvu1g2538 1 50466278 50472041 ECH
Pvu1g2538 1 50466278 50472041 Pvu8g2292 8 53386752 53391055 PCT