Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2534 ATGGCGAACGTGGACGAACTCTTATCTTCCTTAATCTCAGACATCCATTCGTACACCGACAAAGACCCTCTTCTCCCATGGCTTCGCGCGATCCGAAAGATAAAGGATACTCTTCCTCCCAAAATCCTGAAGGAAAAACTACCCGCGTTCTTGCAGAAATGCGCTCACACCTTCGAGCTCGATCGACGTTACAGAAACGACATGCGCTATATTCGAGTGTGGCTCCATCTGATGGATTTTTCGAGTGATCCAAAAACACTTTTGAGTACCATGGAGGTTAATCGCATTGGAACAAAACGTTCTGAATTCTACCAAGCCTATGCTCTTTACTACGAAAAGATCAAGAAGTACGATGAAGCAGAGAGAATGTACCATCTGGGAGTGAAGAACCTTGCAGAGCCTCAAGATAAATTGCAGAAATCATATGAACAATTTCTTCAACGCATGGAGCAGCGAAAAAATAAGAGAGCCCAGCATCAGGAACCAAAAGCTGCCAGGAGGCCTCTATCTTCAAAGAGTTCTCTTGACAACAAGATAGAGGGAAGCAAAAGCAATGGAGCATGTTGCATTGAGGGTGTGCAAAAGGGGCCCGAAATTCAGAATTATGAAGCTAAAGGTGTAGCTAATGATAGACACTTAAAGACTAAGAAGGATGAGTGCAAGAACTTTCGTGGTGATGATACAGTTGTAGTCAAATTTGTTGACACTGCCATGGTTGGAAAGTCTGAAGCAGAAGATGCATGCCATCATGGATTGGTGGATCCTACAATAAATATGAAGGAGGCCATGAATGCCATCAACAGCATGTTCCGGGAGCCATTGGAGACTAGACCATTAGGAAGGAAGTCACATAAAAACCATTCAAAAGAAATTCGTAGTACAAAGAACGAGTTTGAGGTTTTTGTTGATGAAAACTTGGATCATGAAATCAAGTCATCCGGTTCCCTCTCACTTCAGAAAAGGACTGAAGCCAGCCAACCTCACCAAGAACCGCTCCAGATATACATTGATGATGAAGAACATTCCGAGACCAGTAATGCGAATTTGTCTGAAGGTGGTTCTGCTTCATCGGCTTCACAATCGAATGACTTTGTTTTTCTCCGCCCCAAGGATATCACTTCTGAAAAATGTGACACGGATGCTGAAAGCTCTCGTAATTCAAAATTCAGAGAGGATACAGTTGTTTGCAAATTTGTTGGTTCCACCATTTTGGGTGAACCAGATGTGGAAAATGTTTGCCACCACGGTTTAGTAGAGCCCACCATCAACTTGAAGGAAGCTATGGATGATATAAATAACATGTTTGGGAAGCCAATAGATTTTGTTAGGAAAAGAAGAACCACCAAGCAGGAGAAAGCACCTCAGAGCAAAAGGGGAAATGACTTTGGTGGCTTTTCAATCCTTGCTGACGATGACCACCTGGAACAGAAAGTTCCACTACCACCACCAAAATTGCCAGGAAAGTCCAAGGAATCTGATTTGTTTGAGCCAACTCTCCTCACAAAGGAAGCCATGGACGATATAAACGAAATGTTTAACATGCCCCTGAATTTTTAG 1557 0.4297 MANVDELLSSLISDIHSYTDKDPLLPWLRAIRKIKDTLPPKILKEKLPAFLQKCAHTFELDRRYRNDMRYIRVWLHLMDFSSDPKTLLSTMEVNRIGTKRSEFYQAYALYYEKIKKYDEAERMYHLGVKNLAEPQDKLQKSYEQFLQRMEQRKNKRAQHQEPKAARRPLSSKSSLDNKIEGSKSNGACCIEGVQKGPEIQNYEAKGVANDRHLKTKKDECKNFRGDDTVVVKFVDTAMVGKSEAEDACHHGLVDPTINMKEAMNAINSMFREPLETRPLGRKSHKNHSKEIRSTKNEFEVFVDENLDHEIKSSGSLSLQKRTEASQPHQEPLQIYIDDEEHSETSNANLSEGGSASSASQSNDFVFLRPKDITSEKCDTDAESSRNSKFREDTVVCKFVGSTILGEPDVENVCHHGLVEPTINLKEAMDDINNMFGKPIDFVRKRRTTKQEKAPQSKRGNDFGGFSILADDDHLEQKVPLPPPKLPGKSKESDLFEPTLLTKEAMDDINEMFNMPLNF* 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2534 518 Pfam Mad3/BUB1 homology region 1 11 128 IPR013212 -
Pvu1g2534 518 MobiDBLite consensus disorder prediction 341 362 - -
Pvu1g2534 518 MobiDBLite consensus disorder prediction 150 166 - -
Pvu1g2534 518 ProSiteProfiles BUB1 N-terminal domain profile. 11 167 IPR013212 -
Pvu1g2534 518 PANTHER MITOTIC CHECKPOINT SERINE/THREONINE-PROTEIN KINASE BUB1 4 518 IPR015661 GO:0007094
Pvu1g2534 518 PANTHER OS11G0128700 PROTEIN 4 518 - -
Pvu1g2534 518 MobiDBLite consensus disorder prediction 474 493 - -
Pvu1g2534 518 MobiDBLite consensus disorder prediction 150 180 - -
Pvu1g2534 518 MobiDBLite consensus disorder prediction 346 362 - -
Pvu1g2534 518 Gene3D - 9 166 - -
Pvu1g2534 518 SMART mad3_bub1_i 4 128 IPR013212 -
Pvu1g2534 518 MobiDBLite consensus disorder prediction 446 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2534 Pvu-Chr1 50441273 50443822 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2534 - - gmx:100806627 862.833
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2534 1 50441273 50443822 Pvu1g2534 1 50441273 50443822 ECH