Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2506 ATGAGTGGGAAACACTACCAAATCACAGGATCCACCATGGGTTTCTCCTCAAAAGAAGACAAATCCAAGAGAATAATGAGGGGCTTCAAGACTCTGTTCTTCTTGATCACTATGGTTATATCGCTTCTTCTGTTCTCTGCCCCGGTTCTCCTTGTTATTGCCGATGCACTCCTCCCTTCGGCTCTTCTCTCAACCATTTCCCCCTCCTCTTTCTCCTTGGAAAATCTCGCTTCCCATTTCCACCACTACGATTTCCGATCCTCCCTCATTGATATTCCCCTTATCTCCATAATACGATCCTTCATCATCTTCTGTGTTTATAGTTTGTGTGATGGACCAAGGCTTTCGCACGGACCTTATTTGGGGATTACGACCATGTGTTCTGTTTTGTCTCTGATGTTTGTGTCGTTGAAGGCTGTTTACATCTTCAGTGTTTGGGGGTTAGATCGAAGTGGGCATGTTGGAGGAACCGAAATAGCTCTGTTCGTGTGCTCTTGTGCGTTGGCCGTGGGGCATGTTGTCGTGGCCTACAGAACAAGTTGCAGGGAAAGAAGAAAGCTTTTGGTCTACAAAATTGACATTGAAGCTATTTCAGCTTGCAAAAATGGGTATCCCAGGTATCTCAAGATTCTTCAGGAAGAACGAATCAAATGA 654 0.4495 MSGKHYQITGSTMGFSSKEDKSKRIMRGFKTLFFLITMVISLLLFSAPVLLVIADALLPSALLSTISPSSFSLENLASHFHHYDFRSSLIDIPLISIIRSFIIFCVYSLCDGPRLSHGPYLGITTMCSVLSLMFVSLKAVYIFSVWGLDRSGHVGGTEIALFVCSCALAVGHVVVAYRTSCRERRKLLVYKIDIEAISACKNGYPRYLKILQEERIK* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2506 217 PANTHER ALPHA/BETA HYDROLASE RELATED PROTEIN 13 215 - -
Pvu1g2506 217 Pfam Cholesterol-capturing domain 73 141 IPR019498 -
Pvu1g2506 217 PANTHER ALPHA/BETA HYDROLASE RELATED PROTEIN 13 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2506 Pvu-Chr1 50195083 50197756 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g2506 20 210 Miscellaneous Gene Families AT1G80280 40.566 3.18e-40 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2506 - - pvu:PHAVU_001G242400g 410.609
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2506 1 50195083 50197756 Pvu1g2506 1 50195083 50197756 ECH
Pvu1g2506 1 50195083 50197756 Pvu8g2321 8 53777627 53778625 PCT