Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2505 ATGAGAATCACGTTGGAGCCGAGCTCGGAGCCGAGCCCAAGCCACTCCCAAACTCCCAAAGACGAAGTCGAGTGGGTCCCGCTTCCCAAGCATCCTCTCTTCACCGCACACGGCGGCGCCAACATTGCCGCTTACCGGAATCTCCTGGCCTGGGACGGAGCCTCGCGCCTCTACTTCTGGGACGCCAACAACCGCTTCCTCCACCGCCTCTCTCTCCGACTTGGCGACCCCGATCCCTCTTCCGTCCTCGCCTCTTCGCCCTCGAAGGTGTTGCAAGCGGACGCGGTGCTCGATTTCGACGTCCACAAAATCTCCATCAACAGGAACGGAACAGCAATACTCCTTTTCGGTTCCGAAACGCTCTCTGTCATGTATCTCTACGGACGCGCATCTAAGAAGGATGTGAACTTGATTTGCAGGACTATTACTGTTGGTTCTCATGCACATTCCACTGGTGGCAATGATATTCGGGTGTTACAAGTATTATGGCACCCTTACAGTGATACTCATTTGGGAATTCTTTCTTCTGACTCAGTTTTCAGACTTTTCAACCTGGCTGTGGATCCTTTGCAACCAGAGCAAGAATATTATTTACAGCCTGTTGAGCCGGGTAGATCTAGAAATGCCTCATCAGTGTGCCCAGTTGATTTTTCTTTTGGGGGTGACCACTTATGGGACAGGTTTAGTGTTTTTATTTTGTTCAGTAATGGGGCTATCTATGTACTCTGCCCCATTGTTCCATTTGGAAGTCTCTTCAAATGTGAGTCCTTGGTAGAAATATATAATGATGCTCACACATTTGGAATAATATCAGCCAACTCTGTTGCTGCAAGTAATTCAAAGTTGGCAATCTCCTGGTTAGAAGCAACATTTCCTGAGTTACAGAACCAAGACACTGAAGGAGACAGTCTGTCCTTGCTAAGAGCTCATGCTTATTCTTTATTTGATGCATCTCTTGTCTTGCAGGGACCTCTGCGAAGAGTAGGTCAGGATGGAAATGAAGATTCATTTGGTTGTAGTGCAGAATGTGAAGGTCGTGCAGTTAGTTTTCTGTACAATTTAGTCAGTAAAGACTCTATTTTGGTGACTGCCTGGAGTGGTGGGCAATTGCAGATAGATGCTCTAGCCGATGAGATCCAACCTGTCTGGTGTGTTGGTAGTCCGCCTCGTCTTCGTGTTGATTCCCATGACCAAATTCTTGGCCTTGCTATGATTTGTGAGTCAATTACCTGCAGTAGTCTGGGGAAGGTTGATCATAATGCCTGGTTGGGTAATCCACCCCCTTTACTGAGACTGGCTATTGTTGATTTGGCTCTGCCACGAAGAGCAGAAAGTGGTTATAATATTTCTTTGTTCATTGATATGCTTATGCCAGAAAGAATATATTCCCTTCATGATGGAGGGATTGACTCAATAGTTTTACATTTTCTTCCATTTACTAGTCAGTCAAATGGCAAGGATGATACAATGAAAACACCGTCTGTGCACCCTGTGTTAAATACTTGCCAGAGTCGATACACCTCAGAGCCCTCAATTTGTGGCTTTGCGTCTTTATCAGATTCATTTGGATATTCATGGATTGTAGCTATTACACTTTCTCTTGAGTGTGTTGTGCTTGAGATGAAAAGTTGGAACCTCTTGCTTCCAGTAAGCATTGATTTGGAGAAGAAACCCATTTCATCAGAGGGGGAATCAAAGGAGAGAGATATACCAACAATAATTAGCAAAGAACTACTTAGTGGACCCAAGGAGGTACTTGTTCCCCATGCCTCTCCAAGTTTGCGTTCTGTTGCAGCTGATTCAATTGAAGGTCGATCAACATTACATCAGTATTTCAAGCTGTTTCATGAAACTTATGTGGAGTATGGACATAAGGTGTACTTGGAGCTCAAGCATCACGCACCTCAGTTGAAGAAAATCATTAATGACCAACATTCTCGTTTAGGCGATGCACAACAGAAACTTTTGAACGGTGAGGAGAAAGAGGCTATATTAAAGAAAAGGTTAGATCGTGCTATTCAAATGCACAATTCTTTGGAAGAGCGCTTGCAACAATTAAGGAACATGCCTTGTGCTCACAAAAAACCACTGTCCAGAGCAGAGCGGCAGTTTAAATCAGAGCTTGACCGCTTTAAGGAAGTTGAGTTGGATGCTTTGCATTCTTCTGTTGATGCACTAAGTGCAAGGCTGAGAAGGCACTTGCAAGCTTCGAAAGCTAATCAGCAACAGAAAACAGCTGGGAAGAAAACTCATGCTGGAGACAATCAGATATCCATGCTCAAATCATCTCTTGAAAAACTCTCACTTGTAAATACTGAGAATTCAAAGAAAGTTAAACTCGTGGAGTCTACATTGAGAAACAAAGAAAGAAGCAGCGGCAGAGAATCAAGTCTGCCTTTGGTCTAA 2406 0.4443 MRITLEPSSEPSPSHSQTPKDEVEWVPLPKHPLFTAHGGANIAAYRNLLAWDGASRLYFWDANNRFLHRLSLRLGDPDPSSVLASSPSKVLQADAVLDFDVHKISINRNGTAILLFGSETLSVMYLYGRASKKDVNLICRTITVGSHAHSTGGNDIRVLQVLWHPYSDTHLGILSSDSVFRLFNLAVDPLQPEQEYYLQPVEPGRSRNASSVCPVDFSFGGDHLWDRFSVFILFSNGAIYVLCPIVPFGSLFKCESLVEIYNDAHTFGIISANSVAASNSKLAISWLEATFPELQNQDTEGDSLSLLRAHAYSLFDASLVLQGPLRRVGQDGNEDSFGCSAECEGRAVSFLYNLVSKDSILVTAWSGGQLQIDALADEIQPVWCVGSPPRLRVDSHDQILGLAMICESITCSSLGKVDHNAWLGNPPPLLRLAIVDLALPRRAESGYNISLFIDMLMPERIYSLHDGGIDSIVLHFLPFTSQSNGKDDTMKTPSVHPVLNTCQSRYTSEPSICGFASLSDSFGYSWIVAITLSLECVVLEMKSWNLLLPVSIDLEKKPISSEGESKERDIPTIISKELLSGPKEVLVPHASPSLRSVAADSIEGRSTLHQYFKLFHETYVEYGHKVYLELKHHAPQLKKIINDQHSRLGDAQQKLLNGEEKEAILKKRLDRAIQMHNSLEERLQQLRNMPCAHKKPLSRAERQFKSELDRFKEVELDALHSSVDALSARLRRHLQASKANQQQKTAGKKTHAGDNQISMLKSSLEKLSLVNTENSKKVKLVESTLRNKERSSGRESSLPLV* 802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2505 801 MobiDBLite consensus disorder prediction 1 19 - -
Pvu1g2505 801 Pfam Nuclear pore component 448 782 IPR019321 -
Pvu1g2505 801 Pfam Nuclear pore component 44 220 IPR019321 -
Pvu1g2505 801 MobiDBLite consensus disorder prediction 734 755 - -
Pvu1g2505 801 Coils Coil 662 689 - -
Pvu1g2505 801 PANTHER NUCLEOPORIN NUP84-RELATED 16 790 IPR037700 GO:0000055|GO:0000056|GO:0006913|GO:0017056
Pvu1g2505 801 MobiDBLite consensus disorder prediction 1 21 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2505 K14318 - gmx:100801853 1424.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2505 1 50187613 50193258 Pvu1g2505 1 50187613 50193258 ECH