Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2488 ATGGCGTCATCGCGTCCCCCACCGTCGAAATCAGTGGATCTGGACCTCACCATCGTGGCGGCGAAGCACCTCAAGAACGTCAACTGGAAGAACGGCGATCTCAAGCCCTACGTCGTTTTCTGGGTCGACCCCGAACGCCGTCTGGCCACCAAATCCGACGACTCCGGCAACACCTCCCCCGTCTGGAACGAGCGCTTTGCCCTCCCCCTCCCTCTCCCCCTCCACGACTCCTTCCTCACCCTCGAGATCTTCCACTCCAAACCCTCTGACACCCTCAAACCCCTCGTCGCCACCCTCCGCCTGCCCCTCAAGGACCTCCACGACCTCAACGACTCCACGCGCCTCCGCAAGTTACCCCTTTCCCGCCCCTCTGGCCGCCCCCACGGCAAGATCCACCTCAAACTTGGCCTCCTCGGCCGCCCCCAATTCCAATCCCTAGACTACCTCAACCCTAACCATAACCCAAACCCCAATCCCAATCCCAACCCTAACCCCAACCCTAATTTCGTATTCCCCACCCCTAACTCTAACCCTAATTTAGTCTTCTACAGGGGATATTCCCACTCCGCTTCTCCACCACCCTCTCCATACCCCTCCTACACCTCTTACACCGATTCATATAACTCTTCTTACTATCCCGGTTACTATTCCGGTGCCCCTCCTCCTCCTCCTCCGAGACCCTTCTTCGACCGTTACGCTGGGCCCAGTGGGCCTTCCGCTCCGCTTGATTATTCCACCTCCTACGATCCCAAGCCCAAGTCTTCCAAAATGGGCCTAGGCGCTGGCCTCGCGGTTGGCGCTGTTGCTGGAGCTCTCGGTGGGCTTGCTCTCGAGGAGGGACTTAAATACGAAGAGGACAAAATCGCGGAGAGGGTCGAGAACGACGTCGCTGCTAATGTTGCGCGCGACGATTACAGCGATTATCGAGTGGATTACTGA 939 0.5836 MASSRPPPSKSVDLDLTIVAAKHLKNVNWKNGDLKPYVVFWVDPERRLATKSDDSGNTSPVWNERFALPLPLPLHDSFLTLEIFHSKPSDTLKPLVATLRLPLKDLHDLNDSTRLRKLPLSRPSGRPHGKIHLKLGLLGRPQFQSLDYLNPNHNPNPNPNPNPNPNPNFVFPTPNSNPNLVFYRGYSHSASPPPSPYPSYTSYTDSYNSSYYPGYYSGAPPPPPPRPFFDRYAGPSGPSAPLDYSTSYDPKPKSSKMGLGAGLAVGAVAGALGGLALEEGLKYEEDKIAERVENDVAANVARDDYSDYRVDY* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2488 312 PANTHER C2 DOMAIN-CONTAINING PROTEIN-LIKE 8 308 - -
Pvu1g2488 312 CDD C2_SRC2_like 13 133 IPR044750 GO:0006952
Pvu1g2488 312 Gene3D C2 domain 3 138 IPR035892 -
Pvu1g2488 312 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 6 139 IPR035892 -
Pvu1g2488 312 ProSiteProfiles C2 domain profile. 1 120 IPR000008 -
Pvu1g2488 312 PANTHER INGRESSION PROTEIN FIC1 8 308 - -
Pvu1g2488 312 MobiDBLite consensus disorder prediction 144 174 - -
Pvu1g2488 312 MobiDBLite consensus disorder prediction 223 253 - -
Pvu1g2488 312 Pfam C2 domain 13 109 IPR000008 -
Pvu1g2488 312 SMART C2_3c 13 115 IPR000008 -
Pvu1g2488 312 MobiDBLite consensus disorder prediction 154 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2488 Pvu-Chr1 50049323 50050680 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2488 - - gmx:102666594 388.652
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2488 1 50049323 50050680 Pvu1g2488 1 50049323 50050680 ECH