Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2482 ATGTCCAGTCCGACTTCTAAAGCCACTTGGACACCTGGATTCCATGGTATATTTGTTGATTTGTGCCTTGGAGAAATGTTGAAGAATGAACCTGGGTCAACGCGAATTACCAAGGTGGGTTGGAGGAACATTGTTGGATCCTTTTATGCGAAGACTGGTGTGAGATATGACAAAAAGCAATTTAAGAATCACTATGATTCTACCAGAAAACTATGGAAAATCTGGGTCAAGTTGACTGATGACAGCAGCATGAAGTGGGATCCAGAAACGAGGACGTTTGGTGCTTCTGAGGAAGACTGGCAAAATTATATAAAGGCAACCCCAGAAGCTGCGCAGTTTCAGTCTAAGGAAATCCAGTTTACAGACAAACTGGATATCATCTTTGATGGAGGAAATCGAGTTGAAGAAATGAAAAGGTGGGCCAGTCTCAAGTGGCACAATGATGCTTCAGCTACATCTCCTTTGCGTGGAAAAGAGCGAGAGAAGAAACGCAAGTATGTGGGTAGGGATTATGAATCGGATAGTACCATTATGGTTGGCTGTTCACCTACACCAAAAGCTTCTTGGACACCTGCATACCATAAAATGTTTGTTGATTTGTGCATTGAAGAAACATTGAAGGGGAACAAGTCTGCTACACATTTTACCAAGGAGGGCTGGAGGAATATTGTCGGATCCTTTAATGCAAAGACTGGTATGAGATACGATAAAAAACAAATTAAGAATCATTATGATTCAACTAGGAAACTATGGAAAGTGTGGGCTAAGTTAATTGGTGATGATAAGATGAAATGGGACCCACAAACCAATACGTTTGGTGCTTCTGAGGAAGATTGGCACAATTGTATGAAGGCATTCCCAGAAGCTGCACAATTTCGGTTTAAGGAGCTCCAGTTTTCTGACAAATTAAGTGTCGTCTTTGATGGAGCTATGCCAACTGAGGAAATGATAGCTATGCTTAAGAGGCAAAATGATGCCTCAGCTACATTGCGTGGAAAAGAGCGTGAGAAGAAACGTAGGAATGTTGGTCGGGATTGTGGATTAAAGAGTGCCATTATGATTAATGCCATCCCAATCAGTACAGTTCCAAGTGAGCAGAGCATGTCCAGTTCATCATATCCCAAGGTCAAAGCTGCATGGACTCCTACAGTGCACGGGATCTTTGTTGATCTATGTCTGCAGGAGACACTACAGGGGAATAAGCCCGGGACACATTTTACAAAGGAAGGTTGGAAAAACATTATGGAATCATTTTATGCAAAAACTGGTTTAAATTATGGTAGATTACAACTTAAGAATCACTGGGATTCTACCAAGGAACAATGGAAAATTTGGTGTAAGCTTATTGGCACCAGTTACATGAAATGGGATTCATATAAACTGAAGTTTGAGGCTAGTGAAGAAGATTGGAGCAACTATTTAGAGGAAAATCCAGAAGCTTCACAATTTCGCGTAAAGGGGCTACAATTCACTGAGATATTGGAAGCCATCTTTAATGGAACTACAACTACTGTTACTGGAGAGACTGAACCTACCGCTCAACAAAGGAAAAGTGATGATAGTGTTGTTACTTTCCCTTTTCACACAAAAGAACCTGACACAGCCAACTTTGACGAGAAAACTGAATGTCATTGTGATGCTGTTGCGTCAAGAAATGGTGTAAGTATTCAAAAGAATACTAGTGCAGTTTCATCCACAGAAGACAAATGCAATTATAGCATCGGTCAATGCATTGAGTGCCTTGATAGAATGGAAGAAATAGAACAAGGAAGTGATCTCTACATGTTTGCTTTAGATGTATTCCTTAAGCAGGAATATAGAGAAATTTTTCTGCAATTGAAAACGGCTAATCTGAGGATCTCATGGTTGCAGCGGCTTCAGTCTAGCGGTCAGCATCCGGTCTAG 1905 0.4089 MSSPTSKATWTPGFHGIFVDLCLGEMLKNEPGSTRITKVGWRNIVGSFYAKTGVRYDKKQFKNHYDSTRKLWKIWVKLTDDSSMKWDPETRTFGASEEDWQNYIKATPEAAQFQSKEIQFTDKLDIIFDGGNRVEEMKRWASLKWHNDASATSPLRGKEREKKRKYVGRDYESDSTIMVGCSPTPKASWTPAYHKMFVDLCIEETLKGNKSATHFTKEGWRNIVGSFNAKTGMRYDKKQIKNHYDSTRKLWKVWAKLIGDDKMKWDPQTNTFGASEEDWHNCMKAFPEAAQFRFKELQFSDKLSVVFDGAMPTEEMIAMLKRQNDASATLRGKEREKKRRNVGRDCGLKSAIMINAIPISTVPSEQSMSSSSYPKVKAAWTPTVHGIFVDLCLQETLQGNKPGTHFTKEGWKNIMESFYAKTGLNYGRLQLKNHWDSTKEQWKIWCKLIGTSYMKWDSYKLKFEASEEDWSNYLEENPEASQFRVKGLQFTEILEAIFNGTTTTVTGETEPTAQQRKSDDSVVTFPFHTKEPDTANFDEKTECHCDAVASRNGVSIQKNTSAVSSTEDKCNYSIGQCIECLDRMEEIEQGSDLYMFALDVFLKQEYREIFLQLKTANLRISWLQRLQSSGQHPV* 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2482 634 Pfam Myb/SANT-like DNA-binding domain 9 103 IPR024752 -
Pvu1g2482 634 Pfam Myb/SANT-like DNA-binding domain 380 473 IPR024752 -
Pvu1g2482 634 Pfam Myb/SANT-like DNA-binding domain 188 281 IPR024752 -
Pvu1g2482 634 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN-RELATED 181 310 IPR045026 -
Pvu1g2482 634 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN-RELATED 5 163 IPR045026 -
Pvu1g2482 634 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN-RELATED 305 632 IPR045026 -
Pvu1g2482 634 PANTHER L10-INTERACTING MYB DOMAIN-CONTAINING PROTEIN 5 163 - -
Pvu1g2482 634 PANTHER L10-INTERACTING MYB DOMAIN-CONTAINING PROTEIN 305 632 - -
Pvu1g2482 634 PANTHER L10-INTERACTING MYB DOMAIN-CONTAINING PROTEIN 181 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2482 Pvu-Chr1 50005140 50008336 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2482 - - gmx:100793529 1158.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2482 1 50005140 50008336 Pvu1g2482 1 50005140 50008336 ECH