Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2480 ATGATCGGCGTCGGAAAGGTCAAGCAGTACGGTAACGTCCTCGACAAGCCCCTCAACAAGGGCAAGCAAGAGGTTAGTTTGAGTGCATTCGCGTTCTTGTTTTCGGAGCTTGTTCAGTACAACCAAACGCAGGTCGATAATATTGGGGAACTCGAACGAAGACTGGAGGATGCTGGATATGCGGTTGGGGCACGAGTTCTTGAGCTGCTTTGCCACAGAGATAAGGTAATCCTTGACCCGGATATGAGGGGCTACTATAGTGGGCAATCCAGCAGTATCCTCTCTTTGAAGGATTTATCACTTGGAATGGGAAACAGAAGGGAGACACGGCTGTTGGGTATTCTTTCTTTTGTACACAGTACAGTGTGGAAAGTATTATTTGGAAAGGTAGCTGATTCACTGGAGAAAGGAACCGAACATGAAGATGAATACATGATTAGTGAAAAAGAGCTTCTAGTAAACAAATTCATTTCTATCCCAAAGGACATGGGGACGTTTAACTGTGGAGCATTTGTTGCTGGAATAGTACGGGGCGTTTTGGACGGTGCCGGATTTCCAGCTGTTGTAACTGCGCATTTTGTGCCCATGGAAGGTCAACAGCGACCACGGACGACAATTTTGATAAAGTTTGCTGAAGAGGTGTTACAAAGAGAAGCAAGATTAGGCTGA 669 0.4589 MIGVGKVKQYGNVLDKPLNKGKQEVSLSAFAFLFSELVQYNQTQVDNIGELERRLEDAGYAVGARVLELLCHRDKVILDPDMRGYYSGQSSSILSLKDLSLGMGNRRETRLLGILSFVHSTVWKVLFGKVADSLEKGTEHEDEYMISEKELLVNKFISIPKDMGTFNCGAFVAGIVRGVLDGAGFPAVVTAHFVPMEGQQRPRTTILIKFAEEVLQREARLG* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2480 222 PIRSF TRAPP_1_Trs31 4 222 IPR016696 GO:0030008|GO:0048193
Pvu1g2480 222 PANTHER 41-2 PROTEIN ANTIGEN-RELATED 1 75 IPR016696 GO:0030008|GO:0048193
Pvu1g2480 222 PANTHER 41-2 PROTEIN ANTIGEN-RELATED 103 216 IPR016696 GO:0030008|GO:0048193
Pvu1g2480 222 SUPERFAMILY Ligand-binding domain in the NO signalling and Golgi transport 23 220 IPR024096 -
Pvu1g2480 222 Gene3D Trafficking protein particle complex subunit 3 23 222 - -
Pvu1g2480 222 PANTHER TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 103 216 - -
Pvu1g2480 222 PANTHER TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 1 75 - -
Pvu1g2480 222 CDD TRAPPC5_Trs31 25 210 IPR016696 GO:0030008|GO:0048193
Pvu1g2480 222 Pfam Transport protein particle (TRAPP) component 30 210 IPR007194 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2480 K20280 - gmx:100527008 365.155