Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2475 ATGGGAAGAAGAGACATTGAACTCCAAACAAACAAGGTCTATGGCCACGATGTTGTAGCAGATGCTGAAGGTCCAAGTACCGCTCATCAAATTAGCAGCGATTCATGGTTTCAAGTGGGGTTTATCCTCACGACTGGAATCAACAGTGCCTATGTGCTTGGATATTCAGGGACGGTTATGGTTCCATTGGGATGGACCGGGGGTGTGGTTGGTCTAGTTCTTGCTACCATAATATCGCTCTATGCAAATGCTTTAATTGCTCATCTCCATGAATATGGAGGACAAAGACATATTAGGTATAGAGATCTTGCTGGATATATATATGGAAAGAAAGCCTATTCTCTCACATGGGCTCTGCAGTATATCAATCTTTTCATGATAAACACTGGCTACATCATTTTGGCCGGTTCAGCCTTGAAAGCTACTTATGTTCTGTTCAGGGATGATGGGCTGTTGAAACTTCCATACTGTATTGCCATAGCTGGACTCGTGTGTGCAATGTTTGCCATCTGCATTCCTCATCTTTCAGCTCTTGGAATTTGGCTTGGATTTTCAACTGTCTTCAGCCTAATATACATTATTATATCATTTTTGTTGTCGCTTAAAGATGGATTACATTCACCGCCTCGTGATTACAAGATTCCTGGAGAAGGTTTTAGCAAAGTATTCACGATAATTGGGGCTTCTGCAAACCTTGTGTTTGCATTTAATACAGGCATGCTTCCTGAGATACAGGCAACAATTAGGCAGCCAGTTGTGAAGAACATGATGAATGCACTGTACTTTCAGTTTACTGCTGGAGTTCTACCATTGTACCTAGTTGCGTTTACAGGATATTGGGCCTATGGATCTTCCACATCAGTGTATTTGCTTAATAGTGTGAATGGTCCAGTTTGGGTGAAGGCTACGGCCAATATTACAGCCTTTCTTCAATCGGTCATTGCATTGCATATTTTTGCAAGTCCAATGTACGAGTTTTTGGATACTAAATATGGGATCAAAGGAAGTGCACTGAATGTTAAAAACATGTCGTTTCGAATCGTGGTAAGAGGTGGTTACCTGGCTTTTAACACATTTGTGTCGGCTTTCTTGCCATTCCTCGGAGATTTCATGAGTTTAACGGGGGCGATAAGCACATTTCCCCTTACATTTATTCTTGCAAACCATATGTACCTTAAGGCAAAGGAGGAGAAACTGACAAGCTCGCAAAAGCTCTGGCATTGGTTCAACATTGGTTTCTTTTCCATTATGTCAATTTTAGCAACAATTGCAGCCCTACGACTTATTGCTGTAGACTCCAAAACCTACCATGTTTTTGCTGATGTGTGA 1329 0.4146 MGRRDIELQTNKVYGHDVVADAEGPSTAHQISSDSWFQVGFILTTGINSAYVLGYSGTVMVPLGWTGGVVGLVLATIISLYANALIAHLHEYGGQRHIRYRDLAGYIYGKKAYSLTWALQYINLFMINTGYIILAGSALKATYVLFRDDGLLKLPYCIAIAGLVCAMFAICIPHLSALGIWLGFSTVFSLIYIIISFLLSLKDGLHSPPRDYKIPGEGFSKVFTIIGASANLVFAFNTGMLPEIQATIRQPVVKNMMNALYFQFTAGVLPLYLVAFTGYWAYGSSTSVYLLNSVNGPVWVKATANITAFLQSVIALHIFASPMYEFLDTKYGIKGSALNVKNMSFRIVVRGGYLAFNTFVSAFLPFLGDFMSLTGAISTFPLTFILANHMYLKAKEEKLTSSQKLWHWFNIGFFSIMSILATIAALRLIAVDSKTYHVFADV* 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2475 442 Pfam Transmembrane amino acid transporter protein 34 424 IPR013057 -
Pvu1g2475 442 PANTHER PROLINE TRANSPORTER 1 8 437 - -
Pvu1g2475 442 PANTHER OS05G0424000 PROTEIN-RELATED 8 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2475 Pvu-Chr1 49963578 49968866 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g2475 60 442 Organic Solute Cotransporters AT2G39890 74.935 0.0 608
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2475 - - gmx:100778997 766.533
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2475 1 49963578 49968866 Pvu1g2475 1 49963578 49968866 ECH
Pvu1g2475 1 49963578 49968866 Pvu8g2354 8 54083336 54087504 PCT