Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2474 ATGTCTGGAAGAATAAGGATTGGAGAGAGAGACAGAGACAAAGAGAGAATCATTGTCCCATCGAGAAAACGTAGCGGCATGGTTGCATTCTCCCTCTTCATCTTCTGTTCCTTCATCCTCCTCGGCCAGCCGTCTTATTCCTCCACGCAGCCCCCCAATCTTGACCCTGACAGCATCGACCTCCTCGGCGACGCCCACGTTGTCGCCAACAACGACGCCGCCTCTCACGTGCGCCTCACCGACCCCTCCCCCTCCTCCTCCGGCCTCCTCCGCCGCCCCGAGCCCCTCATCTTCGCCGACGCCACCACCACCCTCTCCACCGAATTCTCCTTCTCCATCTCCGGCAACGGCGATGGCGTCCTCCTCGTCCTCACCGCCGCTTCTGGCAACGGTTCGGATACCGTTGCCGTTGAGTTCGACACGTCCAAGGATGAGAATGTAGGAGACCCCAACTCGAACCACGTTGGCATCGACGTGGGAAGCCACGTGTCCCTGGCTGTCGCGAATGTTTCCGATGTGAACTTGGTTCTCAATAACGGGGAAAAGTTGAATGCTTGGGTTGATTATGAAGCTGGTTCTAAGGGGATGGAAGTTAGGTTAAGCAAATGGGGTGAAAAAAAGCCCTCTGATCCCATTGTTTCTCTTAAGATTGACTTCTATAAGATTTGGCATGGGAATCCTGTGTTTGCGGGCATAACTTCTTCGAACGGTGGCCATTGGATGCAGGTTGTGAGTATCTATTCGTGGAGGCTTAGAATGAATAAAGTTTCAACTGGGTTGCATTCTCTTCCTGTGGATCCGCACGGTTTATCTGAGGATGAGCATAGGAGAGCTTGTCCGTTGACGGTTCTTGCTGGGGTGATTTTTGGAACTGGGTGTGTTGCGTTGGTGACGTTTGTGGTGCTGTTTATGTGGGTGATTTTCTTCCAAAAGGGTTCAGAGGAGTCTCTTGCGAAAATCCCTGATCACCCTTCGGATGTGAGGTATGAAAGAATTGATGTGGCTGTTGAGAGGAATGCGCAGGATGATGAGAGTTAG 1038 0.5241 MSGRIRIGERDRDKERIIVPSRKRSGMVAFSLFIFCSFILLGQPSYSSTQPPNLDPDSIDLLGDAHVVANNDAASHVRLTDPSPSSSGLLRRPEPLIFADATTTLSTEFSFSISGNGDGVLLVLTAASGNGSDTVAVEFDTSKDENVGDPNSNHVGIDVGSHVSLAVANVSDVNLVLNNGEKLNAWVDYEAGSKGMEVRLSKWGEKKPSDPIVSLKIDFYKIWHGNPVFAGITSSNGGHWMQVVSIYSWRLRMNKVSTGLHSLPVDPHGLSEDEHRRACPLTVLAGVIFGTGCVALVTFVVLFMWVIFFQKGSEESLAKIPDHPSDVRYERIDVAVERNAQDDES* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2474 345 ProSitePatterns Legume lectins beta-chain signature. 135 141 IPR019825 -
Pvu1g2474 345 PANTHER CONCANAVALIN A-LIKE LECTIN FAMILY PROTEIN 25 344 - -
Pvu1g2474 345 Pfam Legume lectin domain 75 258 IPR001220 GO:0030246
Pvu1g2474 345 PANTHER LEGUME LECTIN BETA DOMAIN PROTEIN 25 344 - -
Pvu1g2474 345 Gene3D - 45 262 - -
Pvu1g2474 345 CDD lectin_legume_LecRK_Arcelin_ConA 53 254 IPR001220 GO:0030246
Pvu1g2474 345 SUPERFAMILY Concanavalin A-like lectins/glucanases 51 254 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2474 Pvu-Chr1 49956609 49958018 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g2474 63 337 Receptor kinase-like Gene Family AT5G03140 25.836 1.17e-18 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2474 - - vra:106757171 540.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2474 1 49956609 49958018 Pvu1g2474 1 49956609 49958018 ECH