Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2469 ATGGCTGATGCTGCCCTCTGGCTTCCCTCGCACTTTCTTGCCCATCACACCAAGGACAACTGCAAGAACGCCCATTTCCACGCCCCTTTTGCCTTTCCTTCCGAGTTCCCCTACGAGTTCGGACTCTCTTCTCCCACTCTCGAATCTTTCGCGGGCTCCACGGGGACCGAAAGCAGCGACGGCGAAGAGGACTTCTTCGCCGGCCTCTCTCGCCGACTCAGTCAGTCCTCGCTCAACGAACCTCGGAAGCAGCTCTCTGCGATGCCTATTCAACCCGACAATGGGACATTCTCGGAGATTCCGAGGAAGGCTCAGGGTTTAGTCGGGTCGCCGCAGTCGACGCTGACCGGATTCGGGAGCTGGTCGGGTCGGAGCGCGGTGTCCGGCGACGGAAGCCCGAACGGGTACTCTCGTGTTCCTTCGCCCTCGACGACGCCGTTTGATGAAAATAACGACCCCTGGGAAGTCATATACGCCGCCGCCGGACAAGTCGCACGATTGAAGATAAATAACAACCATGTTTCACAGTATGACTTTCAGAACAGTAGGGGTTCAGTTACACATTCTCCGCTTAACCAGAGTTTCAATCAGGTTGCGAGACCTAAGCAGCAGTGCGGTTCGGTTTGGGGAAGGCCAACCAAGCCTAACTGGGTCGTTCAGCCGCAACAGGTTCAGGTTCAGAACAGAGCGCGTGAGTTTGGCCATGAGAGTGTTAATGTGAAATGCACCCGTCCTACATCTTTGCCCCAATCTGCATGGCCCCCTTTGCAAGTTCAGCAACAGAACAACCGGGTGCAGTATGGCGGATCCGGGTCTCGGGTTGCTGTACCCGGTACAGGTGGTGGATCTTCTGTGAAAAGGGGGTGTGGTGGAACTGGGGTGTTCTTGCCTCGTCATTATGAAACAACCCCTTCTGAATCTCGCAAGAAAACTGGCTGTGGTCCTGTCTTGTTACCAGCAAAGGTGGCTCATGCCTTGAACATGAAAATGGATGACCTAAATGGGGTTAACCAACAACGCTTCTCGAGCGCCTTTGCTTCGGATTACGAGGCGATTTTGGCGAGAAGAAAGGCGGTTCTGATGCAGCAGAGATTAAGTGTTGGACGAGAAGAGGCAGCTAACTGTGAAATTCGCCTACCACAAGAGTGGACTTACTAA 1158 0.5423 MADAALWLPSHFLAHHTKDNCKNAHFHAPFAFPSEFPYEFGLSSPTLESFAGSTGTESSDGEEDFFAGLSRRLSQSSLNEPRKQLSAMPIQPDNGTFSEIPRKAQGLVGSPQSTLTGFGSWSGRSAVSGDGSPNGYSRVPSPSTTPFDENNDPWEVIYAAAGQVARLKINNNHVSQYDFQNSRGSVTHSPLNQSFNQVARPKQQCGSVWGRPTKPNWVVQPQQVQVQNRAREFGHESVNVKCTRPTSLPQSAWPPLQVQQQNNRVQYGGSGSRVAVPGTGGGSSVKRGCGGTGVFLPRHYETTPSESRKKTGCGPVLLPAKVAHALNMKMDDLNGVNQQRFSSAFASDYEAILARRKAVLMQQRLSVGREEAANCEIRLPQEWTY* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2469 385 MobiDBLite consensus disorder prediction 114 150 - -
Pvu1g2469 385 PANTHER TIP41-LIKE PROTEIN 27 385 - -
Pvu1g2469 385 PANTHER H/ACA RIBONUCLEOPROTEIN COMPLEX NON-CORE SUBUNIT NAF1-LIKE 27 385 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2469 Pvu-Chr1 49917697 49920144 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2469 - - vra:106757577 633.254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2469 1 49917697 49920144 Pvu8g2361 8 54163432 54165592 ECH
Pvu1g2469 1 49917697 49920144 Pvu1g2469 1 49917697 49920144 ECH
Pvu8g1170 8 13603907 13606567 Pvu1g2469 1 49917697 49920144 ECH
Pvu1g2469 1 49917697 49920144 Pvu8g1170 8 13603907 13606567 ECH
Pvu1g2469 1 49917697 49920144 Pvu8g2361 8 54163432 54165592 PCT