Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2459 GGAGCAAGAAATGGAGAAGAGAAAGGGAGTAGAACTGAGCAAAGTGAAGAAAAATGGGTGCATGATGCATCTGTGGACTATAAAGGCAGAGTACCTCTCCGTGCTTCCACTGGTGTATGGAAAGCCTCCCTCTTTGTCCTCGATGTTCAACCTTGTAAAAAACAAGTGGCATGTCCTAGAAGATTTAGACTTTTACTAGCCACCCGTATGAAAAATTCAAGACGAAAAGTTAGTGACTATGAAAGGTTGAGCTATTTTGGAATAGCCAATAATCTCATCTCGTACCTGACTAAAGTGATGCATGAAGACCTCAAAACAGCAGCCAAGAATGTAAACTACTGGTCAGGAACAACAACCTTAATGCCTCTGGTTGGGGGATTTGTTGCTGATGCCTACACTGGTCGGTTTTATATGGTCTTGTTTTCCTCCTTTCTATACCTCATGCTAAAGCCTTGTGATATTAGGATATGCCAACAACCAAGAAAGATTCATGAAGTGATTTTCTTCCTTTCTCTTTACTGTATCTCCTTCAGTACAGGAGGATACAAACCATGCTTGGAAAGCTTTGGAGCTGACCAATTTGATGATAATCACTTGCAAGAAAGGAAAAAGAAGATGTCTTTCTTCAACTGGTGGAACTTTGCACTGTGCTTTGCATTACTGCTTGGTGCAACCGTGATTGTTTATGTTCAAGACTTTATCAGCTGGGGAGTTGCTTGCCTCATCATTAGTCTTCTTATGGCTCTCACTATCATAGCTTTTTGTGTGGGAAAACCATTTTACAGGTACAAAAGGACAGAAGGAAACCCTTTAAAACCAATTTTACAAGTTTTAATTGCAGCAGTAAGGAAAAGAAATGTGCCTTGTCCTTCAAATCCTGCTTTATTGTATGAGGTCCCAGAGTCAGAGAGGCTTCTAAGACACACTAGTGGGCTAAGGTTTCTTGACAAGGCTGCAATAATTGAAGAGAAACATGTTGAGCAGAAGGAAAGTTCATGGAGATTAGTAACAGTGACAAGAGTCGAAGAAACAAAACTTGTTATAAAATTAATTCCCATATGGCTAACTTCATTAACAGTTGGTGTATACAACTTCAAAATCCCAGCAGCTTCCATGTCCTCTGTTTCAGCGGTTGGTACCTTAATAACGGTCCCAATATATGATAGGATTATTGTTCCAATTTTGAGGAAAGTCACTGGTAATGAAAGAGGCATCAACATTCTTCGGAGGATTGGCATTGGCATGGCATTATCTGTCTTGCTCATGGTTGTTGCTGCCTTGGTAGAAGCAAAAAGACTAAGAATGGCTACACATAACGTCCTCACAGTAGGGGAGGCTAACCATAATACTATGAGCGTGTTGTGGTTGATACCTCAATACTTAGTCCTTGGCGTTGGGGATTCATTTTCTATAATTGGAATGGCTTTGTATCTTAGTGTGCTTGGAGTAGGATTCTTCTTAAGCAGTTTTCTAATCATCATTGTGGACCATCTCACAAGAAAGAATGACAAATGTTGGATAGGCAAGAACATAAATTCAAGTCTTCTCGATATATTTTATTGGATGTTGGCTGTCATAAATGTTTTGGTTTTGTGTTTCTTTCTCTTGGTGACAAAAGGGTACACTTACAAGTCTGTACATAGGAGAGCCATGGACAATGACTGTTATAAGAGTGATGAGGTAGTGATGGTCGCTTGA 1698 0.3993 GARNGEEKGSRTEQSEEKWVHDASVDYKGRVPLRASTGVWKASLFVLDVQPCKKQVACPRRFRLLLATRMKNSRRKVSDYERLSYFGIANNLISYLTKVMHEDLKTAAKNVNYWSGTTTLMPLVGGFVADAYTGRFYMVLFSSFLYLMLKPCDIRICQQPRKIHEVIFFLSLYCISFSTGGYKPCLESFGADQFDDNHLQERKKKMSFFNWWNFALCFALLLGATVIVYVQDFISWGVACLIISLLMALTIIAFCVGKPFYRYKRTEGNPLKPILQVLIAAVRKRNVPCPSNPALLYEVPESERLLRHTSGLRFLDKAAIIEEKHVEQKESSWRLVTVTRVEETKLVIKLIPIWLTSLTVGVYNFKIPAASMSSVSAVGTLITVPIYDRIIVPILRKVTGNERGINILRRIGIGMALSVLLMVVAALVEAKRLRMATHNVLTVGEANHNTMSVLWLIPQYLVLGVGDSFSIIGMALYLSVLGVGFFLSSFLIIIVDHLTRKNDKCWIGKNINSSLLDIFYWMLAVINVLVLCFFLLVTKGYTYKSVHRRAMDNDCYKSDEVVMVA* 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2459 565 Gene3D MFS general substrate transporter like domains 11 550 IPR036259 -
Pvu1g2459 565 SUPERFAMILY MFS general substrate transporter 86 539 IPR036259 -
Pvu1g2459 565 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 76 548 IPR000109 GO:0016020|GO:0022857|GO:0055085
Pvu1g2459 565 Pfam POT family 364 472 IPR000109 GO:0016020|GO:0022857|GO:0055085
Pvu1g2459 565 Pfam POT family 159 357 IPR000109 GO:0016020|GO:0022857|GO:0055085
Pvu1g2459 565 PANTHER OS03G0204700 PROTEIN 76 548 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2459 Pvu-Chr1 49829672 49832556 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g2459 4 547 Organic Solute Cotransporters AT3G53960 45.364 0.0 540
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2459 - - pvu:PHAVU_001G237700g 1108.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2459 1 49829672 49832556 Pvu1g2459 1 49829672 49832556 ECH