Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2458 ATGGAGAAGACAGAGGGAGGTAGAACTGAGAAAAGTGAAGAGAAACGGGTGCATGATGCATCTGTTGACTATAAAGGCAGAGTACCTCTCCGTGCTTCCACTGGTGCATGGAAAGCTGCCCTCTTTGTCCTCACAATTGAATTTAGTGAAAGAATAAGCTACTTTGGAATAGCCACTAATCTTATCTCGTACCTGACTAAAGTGATGCATGAAGACCTCAAAACAGCAGCCAAGAATGTAAACTACTGGTCAGGAACAACAACCCTAATGCCTTTGGTTGGAGGATTTGTTGCTGATGCATACACTGGTCGATTTTATATGGTCCTGTTCTCCTCCTTTGTATACCTCATGGGATTAAGCTTGTTGACCATGTCTCAATTCATCCCAAGTATAAAAGCCTTGCGACACTAG 411 0.4307 MEKTEGGRTEKSEEKRVHDASVDYKGRVPLRASTGAWKAALFVLTIEFSERISYFGIATNLISYLTKVMHEDLKTAAKNVNYWSGTTTLMPLVGGFVADAYTGRFYMVLFSSFVYLMGLSLLTMSQFIPSIKALRH* 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2458 136 PANTHER PROTEIN NRT1/ PTR FAMILY 5.6 19 133 - -
Pvu1g2458 136 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 19 133 IPR000109 GO:0016020|GO:0022857|GO:0055085
Pvu1g2458 136 Gene3D MFS general substrate transporter like domains 8 135 IPR036259 -
Pvu1g2458 136 SUPERFAMILY MFS general substrate transporter 38 126 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2458 Pvu-Chr1 49779345 49780848 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g2458 4 136 Organic Solute Cotransporters AT3G53960 60.902 2.88e-54 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2458 - - pvu:PHAVU_001G237600g 271.552